RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PLPP5Q8NEB5 264 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 OR10C1Q96KK4 312 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 IL36AQ9UHA7 158 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 V9GYS6 101 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 FITM1A5D6W6 292 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 TP53I11O14683 189 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 GALTP07902 379 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 CKBP12277 381 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 FCGR2CP31995 323 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 HRH1P35367 487 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 GLIPR1P48060 266 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 CCR4P51679 360 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 RAC1P63000 192 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 HYAL4Q2M3T9 481 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM31Q5JXX7 168 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF679Q8IYX0 411 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 MARCH1Q8TCQ1 289 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 GPR87Q9BY21 358 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 METTL8Q9H825 291 aaKnown RBP12.39□□□□□ -0.43
HDAC1-206ENST00000476391 OR52A1Q9UKL2 312 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 KLHDC2Q9Y2U9 406 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 URGCP-MRPS24S4R325 110 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 A0A1B0GTH9 108 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 A0A1W2PS29 197 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 AMBPP02760 352 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 ELFN1P0C7U0 828 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 CCKBRP32239 447 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM33P57088 247 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 S100A10P60903 97 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 LMAN2Q12907 356 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 CLEC18BQ6UXF7 455 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 ANKRD9Q96BM1 317 aaPredicted RBP12.39□□□□□ -0.43
HDAC1-206ENST00000476391 JSRP1Q96MG2 331 aaPredicted RBP12.39□□□□□ -0.43
HDAC1-206ENST00000476391 C5orf34Q96MH7 638 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF681Q96N22 645 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 PCBD2Q9H0N5 130 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 Q9N2J8 555 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 HEATR5BQ9P2D3 2071 aa12.39□□□□□ -0.43
HDAC1-206ENST00000476391 KIAA1549LQ6ZVL6 1849 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 TRBV23OR9-2A0A075B6M9 112 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 CEACAM18A8MTB9 384 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF705GA8MUZ8 300 aaPredicted RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 RPL4P36578 427 aaKnown RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 EGR3Q06889 387 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF260Q3ZCT1 412 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 RSPO2Q6UXX9 243 aaPredicted RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ZPLD1Q8TCW7 415 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 GRHL3Q8TE85 626 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 FAM210BQ96KR6 192 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 G6PC3Q9BUM1 346 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ULBP3Q9BZM4 244 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 OR11A1Q9GZK7 315 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 PLEKHA2Q9HB19 425 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 IL17BQ9UHF5 180 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 IKZF2Q9UKS7 526 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 PLAGL1Q9UM63 463 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF780BQ9Y6R6 833 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 NGFRP08138 427 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 OR5H8P0DN80 308 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ERGP11308 486 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 HIST1H1TP22492 207 aaPredicted RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 GDI1P31150 447 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 DLK1P80370 383 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 H3F3AP84243 136 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 INSM1Q01101 510 aaPredicted RBP12.38□□□□□ -0.43
HDAC1-206ENST00000476391 DMWDQ09019 674 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 ARHGAP19Q14CB8 494 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 HAGHQ16775 308 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 GLYATL3Q5SZD4 288 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 CDC20BQ86Y33 519 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 OR13C9Q8NGT0 318 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 C4orf45Q96LM5 186 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 KXD1Q9BQD3 176 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 GPR132Q9UNW8 380 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 HS3ST2Q9Y278 367 aa12.38□□□□□ -0.43
HDAC1-206ENST00000476391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-206ENST00000476391 LDB3O75112 727 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TXNDC12O95881 172 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TK1P04183 234 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF708P17019 499 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 SLC25A1P53007 311 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 GVQW1Q8N7I0 195 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms