RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 CTSZQ9UBR2 303 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 TMCC3Q9ULS5 477 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 SIGLEC7Q9Y286 467 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 ELOVL7A1L3X0 281 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 TXNDC12O95881 172 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 RSPO1Q2MKA7 263 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-209ENST00000463631 C11orf91Q3C1V1 193 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 TBPL2Q6SJ96 375 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 PTCHD4Q6ZW05 846 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 PNLDC1Q8NA58 520 aaKnown RBP14.32□□□□□ -0.12
HMGN1-209ENST00000463631 WDFY2Q96P53 400 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 TECTBQ96PL2 329 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 SIRPDQ9H106 197 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 RERGLQ9H628 205 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 WDR76Q9H967 626 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 ERVK-18Q9QC07 812 aa14.32□□□□□ -0.12
HMGN1-209ENST00000463631 IGHV1-69DA0A0B4J2H0 117 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 LGALS8O00214 317 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 IMPA2O14732 288 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 PTP4A3O75365 173 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 IGHV1-69P01742 117 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 IGHV4-59P01825 116 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 ACSM4P0C7M7 580 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 IER3P46695 156 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 ECH1Q13011 328 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 MAPRE2Q15555 327 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 METTL11BQ5VVY1 283 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 DNM1P34Q6PK57 102 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 SLC22A4Q9H015 551 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 MMADHCQ9H3L0 296 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-209ENST00000463631 SMURF1Q9HCE7 757 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 TRIM36Q9NQ86 728 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 RNF7Q9UBF6 113 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 ZNF281Q9Y2X9 895 aa14.31□□□□□ -0.12
HMGN1-209ENST00000463631 NOP16Q9Y3C1 178 aaKnown RBP14.31□□□□□ -0.12
HMGN1-209ENST00000463631 IGLV1-36A0A0B4J1U3 117 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 DCTN6O00399 190 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 SOCS2O14508 198 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 NDUFA2O43678 99 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 TSPAN15O95858 294 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 CRABP1P29762 137 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 FXYD6P3P58550 94 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 KLF10Q13118 480 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 MPPED2Q15777 294 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 MEP1BQ16820 701 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 IFI44LQ53G44 452 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 PRAMEF6Q5VXH4 476 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 RRM2BQ7LG56 351 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 PLPP7Q8NBV4 271 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 C19orf18Q8NEA5 215 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 FAM46AQ96IP4 442 aaKnown RBP14.3□□□□□ -0.12
HMGN1-209ENST00000463631 FN3KRPQ9HA64 309 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 UFSP2Q9NUQ7 469 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 GID8Q9NWU2 228 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 RPS6KA6Q9UK32 745 aa14.3□□□□□ -0.12
HMGN1-209ENST00000463631 A0A1W2PRQ8 180 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 PPP1R3DO95685 299 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 PRSS12P56730 875 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 MALLQ13021 153 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 DGCR6Q14129 220 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 DPY19L2P2Q6ZN68 376 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 GDPGP1Q6ZNW5 385 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 ZSCAN4Q8NAM6 433 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-209ENST00000463631 SLC26A10Q8NG04 563 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 LRTOMTQ8WZ04 291 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 RSRC1Q96IZ7 334 aaKnown RBP14.29□□□□□ -0.12
HMGN1-209ENST00000463631 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 C16orf95Q9H693 158 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 TCF7L1Q9HCS4 588 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 AP3M1Q9Y2T2 418 aa14.29□□□□□ -0.12
HMGN1-209ENST00000463631 A0A0U1RQK1 487 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 ADAM20O43506 726 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 ZNF682O95780 498 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 ECDO95905 644 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-209ENST00000463631 CDKN2AP42771 156 aaKnown RBP14.28□□□□□ -0.12
HMGN1-209ENST00000463631 RPS6KA3P51812 740 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 C2orf68Q2NKX9 166 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 SLC18B1Q6NT16 456 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 CORO6Q6QEF8 472 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 CFAP77Q6ZQR2 320 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 CBLL1Q75N03 491 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 PGAP1Q75T13 922 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 TSEN54Q7Z6J9 526 aaKnown RBP14.28□□□□□ -0.12
HMGN1-209ENST00000463631 ARPINQ7Z6K5 226 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 HSH2DQ96JZ2 352 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 TSSK2Q96PF2 358 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 ATF6BQ99941 703 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 IER3IP1Q9Y5U9 82 aa14.28□□□□□ -0.12
HMGN1-209ENST00000463631 NBEAL2Q6ZNJ1 2754 aa14.27□□□□□ -0.12
HMGN1-209ENST00000463631 TRAV38-1A0A0B4J264 116 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 OOEPA6NGQ2 149 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 HMGB1P1B2RPK0 211 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 GMDSO60547 372 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 OMPP47874 163 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 HOXA4Q00056 320 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 TRAP1Q12931 704 aaKnown RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 OR8G1Q15617 311 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 SFRP4Q6FHJ7 346 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 Q6ZSV7 163 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms