RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PTP4A1	Q93096	173 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	EME1	Q96AY2	570 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	ZNF799	Q96GE5	643 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	MARS2	Q96GW9	593 aa	Known RBP	10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	MAP6	Q96JE9	813 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	COG8	Q96MW5	612 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	IL4I1	Q96RQ9	567 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	DCLRE1C	Q96SD1	692 aa	Known RBP	10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	C9orf16	Q9BUW7	83 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	TTTY10	Q9BZA0	68 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	DECR2	Q9NUI1	292 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	TBCCD1	Q9NVR7	557 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	IMPAD1	Q9NX62	359 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	DNAJC27	Q9NZQ0	273 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	ANK2	Q01484	3957 aa		10.84	□□□□□ -0.67
FDPS-204	ENST00000461507	ZAR1L	A6NP61	321 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	C17orf100	A8MU93	164 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	ZNF878	C9JN71	531 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	LYNX1	G3V0Z9	82 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	ANXA2	P07355	339 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	H2BFM	P0C1H6	154 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	LYNX1	P0DP58	116 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	SLC2A1	P11166	492 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	SRD5A1	P18405	259 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HNF1A	P20823	631 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	EPHA2	P29317	976 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	IL2RG	P31785	369 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	MAGEB1	P43366	347 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	SLC15A1	P46059	708 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	PRSS12	P56730	875 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HIST1H3A	P68431	136 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	CCL8	P80075	99 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	MRPS11	P82912	194 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HLX	Q14774	488 aa	Predicted RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	GFOD2	Q3B7J2	385 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	SLC35D3	Q5M8T2	416 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HIST2H3PS2	Q5TEC6	136 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	LINC01590	Q5TEZ4	76 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	SLX4IP	Q5VYV7	408 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	MBNL2	Q5VZF2	373 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HIST2H3A	Q71DI3	136 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	MRPL21	Q7Z2W9	205 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	PQLC1	Q8N2U9	271 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	BHLHE23	Q8NDY6	225 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	FAM81A	Q8TBF8	368 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	CMBL	Q96DG6	245 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	REPIN1	Q9BWE0	567 aa	Known RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	OSBPL10	Q9BXB5	764 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	CHODL	Q9H9P2	273 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	MSL2	Q9HCI7	577 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	BRD7	Q9NPI1	651 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	LAMP5	Q9UJQ1	280 aa		10.83	□□□□□ -0.68
FDPS-204	ENST00000461507	IGLV3-9	A0A075B6K5	115 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	LRP5L	A4QPB2	252 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CDC14B	O60729	498 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	TGFA	P01135	160 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	IGHV3-13	P01766	116 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	HPX	P02790	462 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	LYN	P07948	512 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	ACSM4	P0C7M7	580 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	POLR2I	P36954	125 aa	Known RBP	10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CX3CR1	P49238	355 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	ALDH3A2	P51648	485 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CDH15	P55291	814 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CDC42	P60953	191 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	GRB2	P62993	217 aa	Known RBP	10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	PSG7	Q13046	419 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	KRTAP24-1	Q3LI83	254 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	ZMAT1	Q5H9K5	638 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	OR2T2	Q6IF00	324 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	NAA40	Q86UY6	237 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	OR10S1	Q8NGN2	331 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	TMEM163	Q8TC26	289 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CNN2	Q99439	309 aa	Known RBP	10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	ABHD6	Q9BV23	337 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	SAP30L	Q9HAJ7	183 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	PNRC2	Q9NPJ4	139 aa	Known RBP	10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	CYSLTR2	Q9NS75	346 aa		10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	PURG	Q9UJV8	347 aa	Known RBP	10.82	□□□□□ -0.68
FDPS-204	ENST00000461507	ZSCAN5B	A6NJL1	495 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507		H3BSA7	217 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	RP2	O75695	350 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	NCR1	O76036	304 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	ACHE	P22303	614 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	TNFSF4	P23510	183 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	ATP6V1E1	P36543	226 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	RCN1	Q15293	331 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	TRIP10	Q15642	601 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	LRRC36	Q1X8D7	754 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	CR1L	Q2VPA4	569 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	PCGF3	Q3KNV8	242 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	C12orf73	Q69YU5	71 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	ZBTB49	Q6ZSB9	765 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	KRT77	Q7Z794	578 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	GID4	Q8IVV7	300 aa		10.81	□□□□□ -0.68
FDPS-204	ENST00000461507	TIGD4	Q8IY51	512 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms