RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC30A2Q9BRI3 323 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 HCAR1Q9BXC0 346 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 MED20Q9H944 212 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 GCM1Q9NP62 436 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 CMC2Q9NRP2 79 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 DDX28Q9NUL7 540 aaKnown RBP14.93□□□□□ -0.02
LSM5-204ENST00000409909 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 POMPQ9Y244 141 aa14.93□□□□□ -0.02
LSM5-204ENST00000409909 A0A1B0GWJ7 208 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 TCRBV3S1A0A5B6 114 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 C5orf63A6NC05 138 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 FAM183AA6NL82 134 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 RIIAD1A6NNX1 92 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 M0R135 149 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 ZNF593O00488 134 aaPredicted RBP14.92□□□□□ -0.02
LSM5-204ENST00000409909 SURF4O15260 269 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 AVPP01185 164 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 IFNGP01579 166 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 SPARCP09486 303 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 SBK2P0C263 348 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 FMO3P31513 532 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 OTX1P32242 354 aaPredicted RBP14.92□□□□□ -0.02
LSM5-204ENST00000409909 ENTPD1P49961 510 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 TPTEP56180 551 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 FLOT2Q14254 428 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 KRTAP24-1Q3LI83 254 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 LINC01590Q5TEZ4 76 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 SPATA24Q86W54 205 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 SLCO4A1Q96BD0 722 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 ZNF799Q96GE5 643 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 MEGF10Q96KG7 1140 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 UBAP1Q9NZ09 502 aa14.92□□□□□ -0.02
LSM5-204ENST00000409909 PDP1Q9P0J1 537 aaPredicted RBP14.92□□□□□ -0.02
LSM5-204ENST00000409909 IGHV3-64DA0A0J9YX35 117 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 F5H5P2 479 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 H3BN98 237 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 GNGT2O14610 69 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 DNAJC8O75937 253 aaPredicted RBP14.91□□□□□ -0.02
LSM5-204ENST00000409909 HLA-DPB1P04440 258 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 PRKACGP22612 351 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 GRK5P34947 590 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 MMP16P51512 607 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 ZMYND11Q15326 602 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 SNAI3Q3KNW1 292 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 TEX30Q5JUR7 227 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 SLC27A4Q6P1M0 643 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 LRRC28Q86X40 367 aaPredicted RBP14.91□□□□□ -0.02
LSM5-204ENST00000409909 PAPD5Q8NDF8 572 aaKnown RBP14.91□□□□□ -0.02
LSM5-204ENST00000409909 OR6K6Q8NGW6 343 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 TEX47Q8TBZ9 253 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 ST7LQ8TDW4 575 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 SPTSSAQ969W0 71 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 CADM1Q9BY67 442 aaKnown RBP14.91□□□□□ -0.02
LSM5-204ENST00000409909 TMEM100Q9NV29 134 aa14.91□□□□□ -0.02
LSM5-204ENST00000409909 TMEM178BH3BS89 294 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 GSC2O15499 205 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 FKBP6O75344 327 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 PNPP00491 289 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 SELEP16581 610 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 ZNF3P17036 446 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 HOXB6P17509 224 aaKnown RBP14.9□□□□□ -0.02
LSM5-204ENST00000409909 ZFP36P26651 326 aaKnown RBP14.9□□□□□ -0.02
LSM5-204ENST00000409909 POU1F1P28069 291 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 SLC6A9P48067 706 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 BTG1P62324 171 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 MALLQ13021 153 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 PGAP1Q75T13 922 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 ZNF420Q8TAQ5 688 aaPredicted RBP14.9□□□□□ -0.02
LSM5-204ENST00000409909 SLAMF6Q96DU3 332 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 TMPRSS13Q9BYE2 586 aa14.9□□□□□ -0.02
LSM5-204ENST00000409909 E2F6O75461 281 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 PMELP40967 661 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 SRP9P49458 86 aaKnown RBP14.89□□□□□ -0.03
LSM5-204ENST00000409909 PRKXP51817 358 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 LCN2P80188 198 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 CBX1P83916 185 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 ZNF92Q03936 586 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 BNIP1Q12981 228 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 GINS1Q14691 196 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 DRAM2Q6UX65 266 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 SPATC1Q76KD6 591 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 OR2AE1Q8NHA4 323 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 COPS4Q9BT78 406 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 METTL17Q9H7H0 456 aaPredicted RBP14.89□□□□□ -0.03
LSM5-204ENST00000409909 NTN4Q9HB63 628 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 CENPMQ9NSP4 180 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 DNAJB9Q9UBS3 223 aa14.89□□□□□ -0.03
LSM5-204ENST00000409909 LOC105371242A0A075B767 164 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 CYB5R3P00387 301 aaPredicted RBP14.88□□□□□ -0.03
LSM5-204ENST00000409909 SLC2A1P11166 492 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 OSMP13725 252 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 BLVRAP53004 296 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 SEC61A1P61619 476 aaKnown RBP14.88□□□□□ -0.03
LSM5-204ENST00000409909 MAB21L1Q13394 359 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 TMEM155Q4W5P6 130 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 GLYATL3Q5SZD4 288 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 MRPL21Q7Z2W9 205 aaKnown RBP14.88□□□□□ -0.03
LSM5-204ENST00000409909 DPY19L4Q7Z388 723 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 MOGAT3Q86VF5 341 aa14.88□□□□□ -0.03
LSM5-204ENST00000409909 RFLNBQ8N5W9 214 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms