RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CRYGSP22914 178 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 SERPINB10P48595 397 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 ZNF121P58317 390 aaPredicted RBP11.93□□□□□ -0.5
VAPB-202ENST00000395802 ELMOD2Q8IZ81 293 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 CCDC54Q8NEL0 328 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 HSD17B8Q92506 261 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PDCD1LG2Q9BQ51 273 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PBOV1Q9GZY1 135 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 G6PC2Q9NQR9 355 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
VAPB-202ENST00000395802 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 C16orf97H3BN30 126 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PNPP00491 289 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 CD2P06729 351 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 CBR1P16152 277 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 TLE1Q04724 770 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 TBC1D28Q2M2D7 210 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 Q499Y3 187 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 STAC2Q6ZMT1 411 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PRSS35Q8N3Z0 413 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 ITFG2Q969R8 447 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PGAM5Q96HS1 289 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 RGCCQ9H4X1 137 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 ZNF879B4DU55 563 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 B8ZZF3 427 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 J3QW42 95 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 GABRPO00591 440 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 RAF1P04049 648 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 INHBBP09529 407 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 OCM2P0CE71 109 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 PPP3CBP16298 524 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 ACHEP22303 614 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 MFGE8Q08431 387 aaPredicted RBP11.92□□□□□ -0.5
VAPB-202ENST00000395802 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 ACSM3Q53FZ2 586 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 C22orf42Q6IC83 251 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 LINC00299Q6ZSB3 139 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 MDP1Q86V88 176 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 FJX1Q86VR8 437 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
VAPB-202ENST00000395802 IL17RDQ8NFM7 739 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 FGFBP3Q8TAT2 258 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
VAPB-202ENST00000395802 BRD7Q9NPI1 651 aa11.92□□□□□ -0.5
VAPB-202ENST00000395802 ERRFI1Q9UJM3 462 aaPredicted RBP11.92□□□□□ -0.5
VAPB-202ENST00000395802 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 A0A1B0GVI7 797 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
VAPB-202ENST00000395802 SC5DO75845 299 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 IGKV3-15P01624 115 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 ACSM4P0C7M7 580 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 CFL1P23528 166 aaKnown RBP11.91□□□□□ -0.5
VAPB-202ENST00000395802 ASCL1P50553 236 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 INSL4Q14641 139 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 TMEM91Q6ZNR0 172 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 FAM57BQ71RH2 274 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 CEACAM19Q7Z692 300 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
VAPB-202ENST00000395802 SLC24A3Q9HC58 644 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 EIF3KQ9UBQ5 218 aaKnown RBP11.91□□□□□ -0.5
VAPB-202ENST00000395802 DHDHQ9UQ10 334 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 KALRNO60229 2985 aa11.91□□□□□ -0.5
VAPB-202ENST00000395802 C5orf49A4QMS7 147 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 SYT7O43581 403 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 LCATP04180 440 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 CCNOP22674 350 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 MYL9P24844 172 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 RPS19P39019 145 aaKnown RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 KIR3DL2P43630 455 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 ZNF404Q494X3 552 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 ZMAT1Q5H9K5 638 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 COMMD2Q86X83 199 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 C1orf174Q8IYL3 243 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 RELL2Q8NC24 303 aaPredicted RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 CA5BP1Q8WTZ4 195 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 TSEN15Q8WW01 171 aaKnown RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 S100PBPQ96BU1 408 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 ACTR6Q9GZN1 396 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 CKLFQ9UBR5 152 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 SLC22A13Q9Y226 551 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 TBX1O43435 398 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 XRCC2O43543 280 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 IL1AP01583 271 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 TTRP02766 147 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 DBHP09172 617 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms