RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 TSEN15Q8WW01 171 aaKnown RBP13.28□□□□□ -0.28
SCAF11-204ENST00000395454 NABP1Q96AH0 204 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 ABHD1Q96SE0 405 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 EMC7Q9NPA0 242 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 RHBDL2Q9NX52 303 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
SCAF11-204ENST00000395454 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 FLVCR1Q9Y5Y0 555 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 AHRRA9YTQ3 701 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 CD2P06729 351 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 CDAP32320 146 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 MMP15P51511 669 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 PHYHD1Q5SRE7 291 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 C3P1Q6ZMU1 363 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF433Q8N7K0 673 aaPredicted RBP13.27□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF671Q8TAW3 534 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 FNDC9Q8TBE3 224 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 PPP1R14AQ96A00 147 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 TRIB1Q96RU8 372 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 NELFAQ9H3P2 528 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 LIN7BQ9HAP6 207 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 OR5V1Q9UGF6 321 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 MCTS1Q9ULC4 181 aaKnown RBP13.27□□□□□ -0.28
SCAF11-204ENST00000395454 DHDHQ9UQ10 334 aa13.27□□□□□ -0.28
SCAF11-204ENST00000395454 GSTZ1O43708 216 aaPredicted RBP13.27□□□□□ -0.29
SCAF11-204ENST00000395454 CYTIPO60759 359 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 WDR1O75083 606 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 SYNGR4O95473 234 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 TTRP02766 147 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 GABRA1P14867 456 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 MSR1P21757 451 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 PITPNAQ00169 270 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
SCAF11-204ENST00000395454 TAB1Q15750 504 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 HES5Q5TA89 166 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.27□□□□□ -0.29
SCAF11-204ENST00000395454 OR6N1Q8NGY5 312 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 PRRG4Q9BZD6 226 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 RBFOX1Q9NWB1 397 aaKnown RBP13.27□□□□□ -0.29
SCAF11-204ENST00000395454 ASH2LQ9UBL3 628 aa13.27□□□□□ -0.29
SCAF11-204ENST00000395454 ESPL1Q14674 2120 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 IGKV3D-15A0A087WSY6 115 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 SLC22A20A6NK97 555 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 DHHO43323 396 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 SELENOPP49908 381 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
SCAF11-204ENST00000395454 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
SCAF11-204ENST00000395454 ACSF3Q4G176 576 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-204ENST00000395454 LYPD6Q86Y78 171 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 C19orf18Q8NEA5 215 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 DUSP18Q8NEJ0 188 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 CENPMQ9NSP4 180 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 STEAP1Q9UHE8 339 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF462Q96JM2 2506 aa13.26□□□□□ -0.29
SCAF11-204ENST00000395454 ANXA2P2A6NMY6 339 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 SLC17A2O00624 439 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ANXA2P07355 339 aaKnown RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ACSM4P0C7M7 580 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 SF3B4Q15427 424 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 IGFBP7Q16270 282 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ODF4Q2M2E3 257 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 RIPPLY2Q5TAB7 128 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 KLHL24Q6TFL4 600 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 FCRLAQ7L513 359 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 P4HA3Q7Z4N8 544 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 DOLPP1Q86YN1 238 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 CMTM4Q8IZR5 234 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 DRAXINQ8NBI3 349 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 RFT1Q96AA3 541 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 TMEM45BQ96B21 275 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF416Q9BWM5 594 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 NPAP1Q9NZP6 1156 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 TRGV8A0A0C4DH27 118 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 LOC390937A0A1W2PQ73 354 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 TGM6O95932 706 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 CCL1P22362 96 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 OTX1P32242 354 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 NTF4P34130 210 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 MAP2K3P46734 347 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 CASP6P55212 293 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 GRB2P62993 217 aaKnown RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 FAM27BQ5VT28 67 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 PRSS45Q7RTY3 260 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ADGRE4PQ86SQ3 457 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 CELF2-AS1Q8N7Q2 184 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 ABHD3Q8WU67 409 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms