RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CPNE4Q96A23 557 aaPredicted RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 SLC25A36Q96CQ1 311 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 CCDC124Q96CT7 223 aaKnown RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 DDIT4LQ96D03 193 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 ZNF300Q96RE9 604 aaPredicted RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 GFI1Q99684 422 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 ZNF559Q9BR84 538 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 OPN3Q9H1Y3 402 aaPredicted RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 RNF122Q9H9V4 155 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 TMEM27Q9HBJ8 222 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 TIGARQ9NQ88 270 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 PAQR5Q9NXK6 330 aaPredicted RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 NDE1Q9NXR1 346 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
PMS1-202ENST00000374826 RHCGQ9UBD6 479 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 SEC14L4Q9UDX3 406 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 SLC7A7Q9UM01 511 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 SLC9A8Q9Y2E8 581 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 AP3M1Q9Y2T2 418 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 HDGFL3Q9Y3E1 203 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 APCP25054 2843 aa3.78□□□□□ -1.8
PMS1-202ENST00000374826 LRBAP50851 2863 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 A0A087WUJ7 227 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TRAPPC13A5PLN9 417 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 LIPT2A6NK58 231 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 A8MVM7 634 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 LRRN3E7EW58 273 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 hCG_2039718K7EN88 272 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 OGG1O15527 345 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 ZNF208O43345 1280 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 CHP2O43745 196 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 CYTIPO60759 359 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 FMO6PO60774 539 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SS18L1O75177 396 aaPredicted RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 NPIPB7O75200 414 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 GMNNO75496 209 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 DIRAS1O95057 198 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 LYPD3O95274 346 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 IGHV3-9P01782 118 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 MT-ND1P03886 318 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 THY1P04216 161 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 IFNW1P05000 195 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 GPIP06744 558 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 PNMTP11086 282 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 CDH2P19022 906 aaPredicted RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 EDNRAP25101 427 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 GTF2E2P29084 291 aaKnown RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 ERFP50548 548 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 MNAT1P51948 309 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 UGT2B15P54855 530 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SLC35A1P78382 337 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 CBX1P83916 185 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 IL1RL1Q01638 556 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TFF3Q07654 80 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 RASGEF1BQ0VAM2 473 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 GUSBP1Q15486 140 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 EXOC3L2Q2M3D2 409 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SLC25A35Q3KQZ1 300 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 OR2A2Q6IF42 318 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 ZNF613Q6PF04 617 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 ULK3Q6PHR2 472 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 C6orf89Q6UWU4 347 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 CASP12Q6UXS9 341 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TMPPEQ6ZT21 453 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 NUFIP2Q7Z417 695 aaKnown RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 MEX3DQ86XN8 651 aaKnown RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 NKAIN4Q8IVV8 208 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TUSC5Q8IXB3 177 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 C10orf53Q8N6V4 93 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TMEM99Q8N816 258 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 LSMEM1Q8N8F7 131 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 LILRB4Q8NHJ6 448 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 PFN4Q8NHR9 129 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 DNAJA4Q8WW22 397 aaPredicted RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 GEMIN6Q8WXD5 167 aaKnown RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 LZICQ8WZA0 190 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SLC38A4Q969I6 547 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 STARD4Q96DR4 205 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 ZHX1-C8orf76Q96EF9 292 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SLC47A1Q96FL8 570 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SLC41A3Q96GZ6 507 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 GMPPAQ96IJ6 420 aaPredicted RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 PRRC1Q96M27 445 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 NSMCE2Q96MF7 247 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 ZFP3Q96NJ6 502 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 THTPAQ9BU02 230 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SFXN3Q9BWM7 321 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TAPBPLQ9BX59 468 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 SEMA6AQ9H2E6 1030 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 KCNJ16Q9NPI9 418 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 TAS2R1Q9NYW7 299 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 PTTG2Q9NZH5 202 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 C6orf203Q9P0P8 240 aaPredicted RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 CD300AQ9UGN4 299 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 RIMS3Q9UJD0 308 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 RPS6KA6Q9UK32 745 aa3.77□□□□□ -1.81
PMS1-202ENST00000374826 PRPF19Q9UMS4 504 aaKnown RBP3.77□□□□□ -1.81
PMS1-202ENST00000374826 DYSFO75923 2080 aa3.76□□□□□ -1.81
PMS1-202ENST00000374826 TRAV36DV7A0A075B6V5 113 aa3.76□□□□□ -1.81
PMS1-202ENST00000374826 TEX13DA0A0J9YY54 714 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms