RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 UBE2CO00762 179 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 GATMP50440 423 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 RANP62826 216 aaKnown RBP13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ZP2Q05996 745 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 DOC2BQ14184 412 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 TEX30Q5JUR7 227 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ALKAL1Q6UXT8 129 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 GPR137CQ8N3F9 429 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 EIF4E3Q8N5X7 224 aaKnown RBP13.95□□□□□ -0.18
SRPK1-204ENST00000373825 C22orf15Q8WYQ4 148 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ADGRL4Q9HBW9 690 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 FUT9Q9Y231 359 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 PRAMEF25A6NGN4 478 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 GFYI3L273 518 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ZNF888P0CJ79 500 aaPredicted RBP13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ZNF728P0DKX0 622 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 TYRP1P17643 537 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 OTX2P32243 289 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 GABRA4P48169 554 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 LBX1P52954 281 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 HLA-DRB3P79483 266 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 DUSP5Q16690 384 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 COL5A1-AS1Q5SY13 56 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 CD200R1LQ6Q8B3 271 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
SRPK1-204ENST00000373825 CARFQ8N187 725 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 OR10AD1Q8NGE0 317 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 RNF128Q8TEB7 428 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 KCND3Q9UK17 655 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 COL4A1P02462 1669 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 OR2M5A3KFT3 312 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 A8MXE2 369 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 LEFTY2O00292 366 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 OLFM2O95897 454 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 KLKB1P03952 638 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 KLK2P20151 261 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 PHYHD1Q5SRE7 291 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 ZNF787Q6DD87 383 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 SLC39A5Q6ZMH5 540 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 AMER3Q8N944 861 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 FAM3CQ92520 227 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 TCTN2Q96GX1 697 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 FOXJ2Q9P0K8 574 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 MYOTQ9UBF9 498 aa13.95□□□□□ -0.18
SRPK1-204ENST00000373825 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 RBFOX3A6NFN3 312 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 F5H5K5 113 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 RAB29O14966 203 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 HMGB3O15347 200 aaKnown RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ADAMTS4O75173 837 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 TRGC1P0CF51 173 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 PMCHP20382 165 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 GLRA1P23415 457 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ACKR3P25106 362 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 NDUFS1P28331 727 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 CD1CP29017 333 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ARIH2OSQ8N7S6 290 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 SLC35A4Q96G79 324 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ZNF2Q9BSG1 426 aaPredicted RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 RNF212BA8MTL3 300 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 NUDT21O43809 227 aaKnown RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 CTSAP10619 480 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 NKX2-1P43699 371 aaPredicted RBP13.94□□□□□ -0.18
SRPK1-204ENST00000373825 EFNB2P52799 333 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ZNF85Q03923 595 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 PYY3Q5JQD4 70 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 ROBO4Q8WZ75 1007 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 CORO2AQ92828 525 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 LHX4Q969G2 390 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 NKX2-4Q9H2Z4 354 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 SMOC1Q9H4F8 434 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 TBX19O60806 448 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 METTL15P1P0C7V9 234 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 PRPH2P23942 346 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 SLC37A1P57057 533 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 CD81P60033 236 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 C7orf61Q8IZ16 206 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 VN1R17PQ8TDU5 208 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 OR1E3Q8WZA6 343 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 HLA-CQ95604 372 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
SRPK1-204ENST00000373825 SLC17A2O00624 439 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 SNAI1O95863 264 aaPredicted RBP13.93□□□□□ -0.18
SRPK1-204ENST00000373825 HNRNPA2B1P22626 353 aaKnown RBP13.93□□□□□ -0.18
SRPK1-204ENST00000373825 PSMB3P49720 205 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 LY6G5CQ5SRR4 150 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 RNF165Q6ZSG1 346 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 MAMDC2Q7Z304 686 aaPredicted RBP13.93□□□□□ -0.18
SRPK1-204ENST00000373825 EXD3Q8N9H8 876 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 M1APQ8TC57 530 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 POMT1Q9Y6A1 747 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
SRPK1-204ENST00000373825 DLEC1Q9Y238 1755 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 NPIPA2E9PIF3 369 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 SSSCA1O60232 199 aa13.93□□□□□ -0.18
SRPK1-204ENST00000373825 OR2J2O76002 312 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms