RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 BIDP55957 195 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 RNLSQ5VYX0 342 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 MITD1Q8WV92 249 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 NIPSNAP3BQ9BS92 247 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 LYRM4Q9HD34 91 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 KLHL13Q9P2N7 655 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 METTL1Q9UBP6 276 aaKnown RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 GPR55Q9Y2T6 319 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 HYAL3O43820 417 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 OLFM2O95897 454 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 MUC1P15941 1255 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 HIST1H1CP16403 213 aaKnown RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 DHRS2Q13268 280 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 GAMTQ14353 236 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ZNF528Q3MIS6 628 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ZNF385CQ66K41 422 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 OPN5Q6U736 354 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 PARM1Q6UWI2 310 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 CCL4L1Q8NHW4 92 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 PIGCQ92535 297 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 HIST1H2BAQ96A08 127 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 GAB2Q9UQC2 676 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ARHGAP11BQ3KRB8 267 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 ASTLQ6HA08 431 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-201ENST00000337331 LRRC18Q8N456 261 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 IL1F10Q8WWZ1 152 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 SLC25A28Q96A46 364 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 LRFN5Q96NI6 719 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 SIRT7Q9NRC8 400 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 CGGBP1Q9UFW8 167 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-201ENST00000337331 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 CCDC163A0A0D9SF12 145 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 C2orf72A6NCS6 295 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 CD37P11049 281 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 CD22P20273 847 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 BTCP35070 178 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 FOLR3P41439 243 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 RPS27P42677 84 aaKnown RBP14.56□□□□□ -0.08
NPHP3-201ENST00000337331 ANKRD33Q7Z3H0 272 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 C19orf43Q9BQ61 176 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 PIPOXQ9P0Z9 390 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 MMP7P09237 267 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-201ENST00000337331 MSX1P28360 303 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 BLVRBP30043 206 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-201ENST00000337331 C17orf67Q0P5P2 114 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 IHHQ14623 411 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 MARCH3Q86UD3 253 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 FGGYQ96C11 551 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 EID2BQ96D98 161 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 CDH20Q9HBT6 801 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 ETV7Q9Y603 341 aa14.56□□□□□ -0.08
NPHP3-201ENST00000337331 A0A1B0GTQ1 180 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 DVL1P1P54792 670 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 RAB1AP62820 205 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MPPED2Q15777 294 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 NSUN5P2Q63ZY6 315 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SMIM19Q96E16 107 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 LAT2Q9GZY6 243 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 PCDHGA1Q9Y5H4 931 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 TRAV1-2A0A0B4J238 106 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MED19A0JLT2 244 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 M0R143 59 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SCRG1O75711 98 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SEMG1P04279 462 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SULT1A1P50225 295 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MTCP1P56278 107 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 CDK5R1Q15078 307 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 GUK1Q16774 197 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SLC35D3Q5M8T2 416 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 C9orf135Q5VTT2 229 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 ETV3LQ6ZN32 361 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MKXQ8IYA7 352 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 EIF4E3Q8N5X7 224 aaKnown RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 NKX3-1Q99801 234 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 STEAP1Q9UHE8 339 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 AMDHD2Q9Y303 409 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 NSG1A0A0A6YYJ2 146 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 A8MVM7 634 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 TNFRSF10CO14798 259 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 FAM157BP0CG42 384 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 SLC2A1P11166 492 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 HSD17B7P56937 341 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 DUSP8Q13202 625 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MOB3CQ70IA8 216 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 KCNG3Q8TAE7 436 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MIB2Q96AX9 1013 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 RSPRY1Q96DX4 576 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 NPDC1Q9NQX5 325 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 MRPS28Q9Y2Q9 187 aaKnown RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 G3V3Y1 287 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 PLPP2O43688 288 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 PRKNO60260 465 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 GCM2O75603 506 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 EFNA3P52797 238 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 CLDN17P56750 224 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 CNN3Q15417 329 aaKnown RBP14.55□□□□□ -0.08
NPHP3-201ENST00000337331 NKAIN2Q5VXU1 208 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 TMEM68Q96MH6 324 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 TSSK2Q96PF2 358 aa14.55□□□□□ -0.08
NPHP3-201ENST00000337331 FOXJ3Q9UPW0 622 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms