RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR10H4Q8NGA5 316 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 RFT1Q96AA3 541 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 DACT3Q96B18 629 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ATF6BQ99941 703 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF71Q9NQZ8 489 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 CYSLTR2Q9NS75 346 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 MRPL22Q9NWU5 206 aaKnown RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 COA3Q9Y2R0 106 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 KMT2BQ9UMN6 2715 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-202ENST00000324340 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 SLC22A20A6NK97 555 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 AHRRA9YTQ3 701 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 PRSS44E7EML9 344 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 MPC2O95563 127 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 APOC1P02654 83 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 HLA-DPB1P04440 258 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 QDPRP09417 244 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 CAPZA2P47755 286 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 CSNK1A1P48729 337 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF81P51508 661 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 TEX30Q5JUR7 227 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 PHYHD1Q5SRE7 291 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 CARD17Q5XLA6 110 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF322Q6U7Q0 402 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-202ENST00000324340 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 AAED1Q7RTV5 226 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 KLHL36Q8N4N3 616 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 ALG8Q9BVK2 526 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 RERGLQ9H628 205 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 WDR76Q9H967 626 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 B3GAT2Q9NPZ5 323 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 DLL4Q9NR61 685 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 CACNG2Q9Y698 323 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 FRYQ5TBA9 3013 aa11.26□□□□□ -0.61
DDX39A-202ENST00000324340 TPRP12270 2363 aaKnown RBP11.26□□□□□ -0.61
DDX39A-202ENST00000324340 EPG5Q9HCE0 2579 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 TVP23AA6NH52 213 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 SMLR1H3BR10 107 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 AIPO00170 330 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 CASKO14936 926 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 SNAPINO95295 136 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 GPANK1O95872 356 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 S100A6P06703 90 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 CD53P19397 219 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 LAP3P28838 519 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 CD79BP40259 229 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 TGM4P49221 684 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 HCCSP53701 268 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 BDH1Q02338 343 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF684Q5T5D7 378 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 PYHIN1Q6K0P9 492 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 TUSC5Q8IXB3 177 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 SYS1Q8N2H4 156 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 OR6N1Q8NGY5 312 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 OTOSQ8NHW6 89 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 SMAP2Q8WU79 429 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-202ENST00000324340 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 YIPF5Q969M3 257 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 TBX5Q99593 518 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 USB1Q9BQ65 265 aaKnown RBP11.25□□□□□ -0.61
DDX39A-202ENST00000324340 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 GLRX2Q9NS18 164 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 PARPBPQ9NWS1 579 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 LUZP4Q9P127 313 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF222Q9UK12 451 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 COPS3Q9UNS2 423 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 TMEM14AQ9Y6G1 99 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 CEP295Q9C0D2 2601 aa11.25□□□□□ -0.61
DDX39A-202ENST00000324340 ACACBO00763 2458 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ANKRD61A6NGH8 418 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 H3BUI4 141 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF593O00488 134 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-202ENST00000324340 PHYHO14832 338 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 HPGDSO60760 199 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF254O75437 659 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 SC5DO75845 299 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 HLA-DQA2P01906 255 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ALOX5APP20292 161 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 MAPK3P27361 379 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-202ENST00000324340 MTNR1BP49286 362 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 TDGF1P3P51864 188 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ACTA2P62736 377 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ACTG2P63267 376 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 DYRK1AQ13627 763 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms