RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 C12orf49Q9H741 205 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ZNF275Q9NSD4 429 aaPredicted RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 ZNF224Q9NZL3 707 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ABRACLQ9P1F3 81 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 OR5V1Q9UGF6 321 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 PCDHGA9Q9Y5G4 932 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 LINC00854A0A1B0GVQ3 168 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ANXA2P2A6NMY6 339 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SYNGR3O43761 229 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ANXA2P07355 339 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 OTX1P32242 354 aaPredicted RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 GRB2P62993 217 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 ARF1P84077 181 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 RNPS1Q15287 305 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 TAB1Q15750 504 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ZNF813Q6ZN06 617 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 RBMXL3Q8N7X1 1067 aaKnown RBP16.13■□□□□ 0.17
USP39-201ENST00000323701 ZNF671Q8TAW3 534 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 NIPAL2Q9H841 368 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 GPR84Q9NQS5 396 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 PRSS50Q9UI38 385 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SPATA2Q9UM82 520 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ARHGAP21Q5T5U3 1957 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 A0A096LPE4 126 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 A0A1W2PPZ6 126 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 ZNF503-AS2A6NEH8 195 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 SYT7O43581 403 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 PSG4Q00888 419 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 ABHD12BQ7Z5M8 362 aaPredicted RBP16.12■□□□□ 0.17
USP39-201ENST00000323701 ADGRE4PQ86SQ3 457 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 LYZL4Q96KX0 146 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 ABHD1Q96SE0 405 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 LINC00470Q9BZP3 86 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 RNF122Q9H9V4 155 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 PARPBPQ9NWS1 579 aa16.12■□□□□ 0.17
USP39-201ENST00000323701 SGCEO43556 437 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CRYGSP22914 178 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 AGTR1P30556 359 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 SPOCK1Q08629 439 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CARTPTQ16568 116 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 Q6ZS92 163 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 LUZP2Q86TE4 346 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CMTM4Q8IZR5 234 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 APH1AQ96BI3 265 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 WNT5BQ9H1J7 359 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 MSRB2Q9Y3D2 182 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CHD8Q9HCK8 2581 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CD2P06729 351 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 ABOP16442 354 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 SLC6A9P48067 706 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 FAPQ12884 760 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 DMRTC1Q5HYR2 192 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 SLC16A14Q7RTX9 510 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 RNF144BQ7Z419 303 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 MCEMP1Q8IX19 187 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 IZUMO1Q8IYV9 350 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 Q8N402 240 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 GDPD1Q8N9F7 314 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 FAM71F1Q96KD3 344 aaPredicted RBP16.11■□□□□ 0.17
USP39-201ENST00000323701 SLC17A5Q9NRA2 495 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CLCF1Q9UBD9 225 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 CGGBP1Q9UFW8 167 aaPredicted RBP16.11■□□□□ 0.17
USP39-201ENST00000323701 PIEZO1Q92508 2521 aa16.11■□□□□ 0.17
USP39-201ENST00000323701 LANCL1O43813 399 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 MMP7P09237 267 aaPredicted RBP16.1■□□□□ 0.17
USP39-201ENST00000323701 FSTP19883 344 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 SNAI3Q3KNW1 292 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 SERPINA12Q8IW75 414 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 GCNT2Q8N0V5 402 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 OR2H1Q9GZK4 316 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 FOXJ3Q9UPW0 622 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 NCOR2Q9Y618 2525 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 OR6C6A6NF89 314 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 RPL36A-HNRNPH2H7BZ11 118 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 M0R135 149 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 APOA1P02647 267 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 RAB35Q15286 201 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 PLEKHN1Q494U1 663 aaPredicted RBP16.1■□□□□ 0.17
USP39-201ENST00000323701 METAP1DQ6UB28 335 aaPredicted RBP16.1■□□□□ 0.17
USP39-201ENST00000323701 GDPD3Q7L5L3 318 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 FGD2Q7Z6J4 655 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 BIVMQ86UB2 503 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 COMMD2Q86X83 199 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 UBE2J2Q8N2K1 259 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 ZNF799Q96GE5 643 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 MOB1AQ9H8S9 216 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 ADAM30Q9UKF2 790 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 LHX6Q9UPM6 363 aa16.1■□□□□ 0.17
USP39-201ENST00000323701 RP1L1Q8IWN7 2480 aaPredicted RBP16.1■□□□□ 0.17
USP39-201ENST00000323701 AQP7O14520 342 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 TMIGD3P0DMS9 266 aaPredicted RBP16.09■□□□□ 0.17
USP39-201ENST00000323701 PRSS12P56730 875 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 RIN1Q13671 783 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 FAM166AQ6J272 317 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 ZNF100Q8IYN0 542 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 CPEB3Q8NE35 698 aaKnown RBP16.09■□□□□ 0.17
USP39-201ENST00000323701 OR51D1Q8NGF3 324 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 OR1F12Q8NHA8 337 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 NOX3Q9HBY0 568 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms