RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 C16orf58Q96GQ5 468 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PRRT1Q99946 306 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TIMM29Q9BSF4 260 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ISG20L2Q9H9L3 353 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CUTCQ9NTM9 273 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 USP36Q9P275 1121 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 RNF150Q9ULK6 438 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 GPR52Q9Y2T5 361 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 F6UZH7 168 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PLPP1O14494 284 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 HPRT1P00492 218 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC6A11P48066 632 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC6A9P48067 706 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 POLR2HP52434 150 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ERVFRD-1P60508 538 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 HSF1Q00613 529 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PSG6Q00889 435 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM268Q5VZI3 342 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 RTL6Q6ICC9 239 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ARL9Q6T311 187 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 LINC00114Q6XXX2 140 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 DPY19L2P2Q6ZN68 376 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMED4Q7Z7H5 227 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 LINC01551Q86U37 167 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CMTM1Q8IZ96 169 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 GALNT16Q8N428 558 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM56Q96MV1 263 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TECTBQ96PL2 329 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 NUDT16L1Q9BRJ7 211 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TBL1XR1Q9BZK7 514 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ZBP1Q9H171 429 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 POFUT1Q9H488 388 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 KCNJ16Q9NPI9 418 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM56-RWDD3S4R434 201 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 NUP214P35658 2090 aaPredicted RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 A0A1W2PPV9 198 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PRAMEF27A3QJZ7 478 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC22A31A6NKX4 558 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF727A8MUV8 499 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 BHLHE40O14503 412 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SRPX2O60687 465 aaPredicted RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 LRP3O75074 770 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC16A8O95907 504 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TOMM40O96008 361 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PGA4P0DJD7 388 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PGA5P0DJD9 388 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 FGF5P12034 268 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PTHLHP12272 177 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CD34P28906 385 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ID4P47928 161 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SULT1A2P50226 295 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM33P57088 247 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TAS2R19P59542 299 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 EIF3IQ13347 325 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CRMP1Q14194 572 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ARHGAP11BQ3KRB8 267 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM69Q5SWH9 247 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PRAMEF17Q5VTA0 474 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 LHX8Q68G74 356 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 NIPAL3Q6P499 406 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 Q6ZRG5 221 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 TAS1R1Q7RTX1 841 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 HSD11B1LQ7Z5J1 315 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 GBGT1Q8N5D6 347 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR4C5Q8NGB2 326 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR4D11Q8NGI4 311 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CASTOR1Q8WTX7 329 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ABHD3Q8WU67 409 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 KCNE4Q8WWG9 221 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 DCUN1D4Q92564 292 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC35G5Q96KT7 338 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 MIEN1Q9BRT3 115 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 C1QTNF2Q9BXJ5 285 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ADAP2Q9NPF8 381 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 CMC2Q9NRP2 79 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PLSCR4Q9NRQ2 329 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF281Q9Y2X9 895 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 URGCP-MRPS24S4R325 110 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 MYO10Q9HD67 2058 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 A0A087WWC5 75 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 NDUFB8O95169 186 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 CISD3P0C7P0 127 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SLC35G6P0C7Q6 338 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SMIM10L1P0DMW3 83 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 CALCBP10092 127 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SNCAP37840 140 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 GPR4P46093 362 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 RABIFP47224 123 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 PRRX1P54821 245 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 CNN3Q15417 329 aaKnown RBP5.96□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM241Q24JQ0 296 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 PCGF3Q3KNV8 242 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF311Q5JNZ3 666 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 AWAT2Q6E213 333 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF585AQ6P3V2 769 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 FDX2Q6P4F2 183 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 CNKSR3Q6P9H4 555 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms