RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 EBPQ15125 230 aaKnown RBP12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 NCMAPQ5T1S8 102 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 OTPQ5XKR4 325 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 NPSR1Q6W5P4 371 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 MDGA2Q7Z553 956 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 GKN2Q86XP6 184 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 DTWD2Q8NBA8 298 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 NKD1Q969G9 470 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 PISDQ9UG56 409 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC17A4Q9Y2C5 497 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 HEBP2Q9Y5Z4 205 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 MPDZO75970 2070 aa12.08□□□□□ -0.48
RPUSD4-201ENST00000298317 PLGP00747 810 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 PET100P0DJ07 73 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 MAS1LP35410 378 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 OR2B8PP59922 312 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 IL15RAQ13261 267 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 RAB32Q13637 225 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 FRMD1Q8N878 549 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 NKAIN3Q8N8D7 197 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 FAM46BQ96A09 425 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SLAMF9Q96A28 289 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 RAB3CQ96E17 227 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 LRIT1Q9P2V4 623 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 FLVCR1Q9Y5Y0 555 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 CEACAM18A8MTB9 384 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 ADH1AP07327 375 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC35E2P0CK97 266 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SKP2Q13309 424 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 UNC119Q13432 240 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 AGBL4Q5VU57 503 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 WBP2NLQ6ICG8 309 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 CLEC18BQ6UXF7 455 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 CACUL1Q86Y37 369 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 CA13Q8N1Q1 262 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF383Q8NA42 475 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 POC1AQ8NBT0 407 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC26A1Q9H2B4 701 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 RGCCQ9H4X1 137 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 GPR132Q9UNW8 380 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 B9D1Q9UPM9 204 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 NOTCH4Q99466 2003 aa12.07□□□□□ -0.48
RPUSD4-201ENST00000298317 LAMA3Q16787 3333 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 TNFSF14O43557 240 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 TIMP1P01033 207 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 CST4P01036 141 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 PMP2P02689 132 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 HKR1P10072 659 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 DAOP14920 347 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 DNASE1L1P49184 302 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 CHST4Q8NCG5 386 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 C8orf44Q96CB5 159 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 MARS2Q96GW9 593 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 G6PC3Q9BUM1 346 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 K7EQS6 105 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 M0R036 132 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 OR10H2O60403 315 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 HOXB5P09067 269 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 HOXA5P20719 270 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 SNCAP37840 140 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 SULT1A1P50225 295 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 PPA1Q15181 289 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 RHEBQ15382 184 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 CSNK1A1LQ8N752 337 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 OR13C3Q8NGS6 347 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 SLC22A18Q96BI1 424 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 C2orf50Q96LR7 162 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 ELF4Q99607 663 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 NRSN2Q9GZP1 204 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 MRPL22Q9NWU5 206 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 HHLA2Q9UM44 414 aa12.06□□□□□ -0.48
RPUSD4-201ENST00000298317 TBC1D3DA0A087WVF3 549 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 TBC1D3LB9A6J9 549 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF264O43296 627 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 SRSF10O75494 262 aaKnown RBP12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 GAPDHP04406 335 aaKnown RBP12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 UCP2P55851 309 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 QRFPP83859 136 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 TBC1D3CQ6IPX1 549 aa12.05□□□□□ -0.48
RPUSD4-201ENST00000298317 PPP1R3BQ86XI6 285 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms