RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MRPL28Q13084 256 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF829Q3KNS6 432 aaPredicted RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 LIPNQ5VXI9 398 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 HIST2H2BCQ6DN03 193 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 FDX2Q6P4F2 183 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 LHFPL3Q86UP9 236 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF485Q8NCK3 441 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ABHD4Q8TB40 342 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 AKAP1Q92667 903 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■■□ 20
VPS25-201ENST00000253794 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 FBXW5Q969U6 566 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 NUFIP1Q9UHK0 495 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 R4GMQ9 66 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 APCP25054 2843 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ROS1P08922 2347 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 GPRIN2O60269 458 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 DANCRP0C864 163 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 FAM157BP0CG42 384 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 C21orf33P30042 268 aaPredicted RBP12.13□□□□□ -0.47
VPS25-201ENST00000253794 THBS4P35443 961 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 IRF3Q14653 427 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 EFNB3Q15768 340 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 MSMPQ1L6U9 139 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 TP53I3Q53FA7 332 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
VPS25-201ENST00000253794 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 PRSS48Q7RTY5 328 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 FAM220AQ7Z4H9 259 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 NAA40Q86UY6 237 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 STX19Q8N4C7 294 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 YIPF7Q8N8F6 280 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 OR1J1Q8NGS3 322 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 IGFBPL1Q8WX77 278 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 NEUROG1Q92886 237 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 SPSB4Q96A44 273 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 RGCCQ9H4X1 137 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 OPA3Q9H6K4 179 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 G6PC2Q9NQR9 355 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 ACOXLQ9NUZ1 547 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 ZNF391Q9UJN7 358 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
VPS25-201ENST00000253794 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
VPS25-201ENST00000253794 FLNBO75369 2602 aaKnown RBP12.12□□□□□ -0.47
VPS25-201ENST00000253794 ABCA12Q86UK0 2595 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 TMEM269A0A1B0GVZ9 245 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 PTGES3LE9PB15 166 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 PSMD9O00233 223 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 MAGEB4O15481 346 aaPredicted RBP12.12□□□□□ -0.47
VPS25-201ENST00000253794 XRCC2O43543 280 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 RGS10O43665 173 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 PNPP00491 289 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 LCATP04180 440 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 HTR1AP08908 422 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 PRF1P14222 555 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 RAC2P15153 192 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 ANOS1P23352 680 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 TTKP33981 857 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 SLC6A9P48067 706 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 TGM4P49221 684 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 OR12D2P58182 307 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 SNAI3Q3KNW1 292 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 TMEM200AQ86VY9 491 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 KLHL36Q8N4N3 616 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 NANOGP1Q8N7R0 232 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 RORBQ92753 470 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
VPS25-201ENST00000253794 C4orf36Q96KX1 117 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
VPS25-201ENST00000253794 GNG8Q9UK08 70 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 SNX5Q9Y5X3 404 aa12.12□□□□□ -0.47
VPS25-201ENST00000253794 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 MT-ND5P03915 603 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 LCKP06239 509 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ANXA2P07355 339 aaKnown RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 SLC2A1P11166 492 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 KITLGP21583 273 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 CCR9P51686 369 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 MFGE8Q08431 387 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms