RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 CDKN2DP55273 166 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZXDAP98168 799 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 NKAIN1Q4KMZ8 207 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 NKAIN2Q5VXU1 208 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZNF322Q6U7Q0 402 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 RFPL4BQ6ZWI9 263 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 LILRB4Q8NHJ6 448 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 NSUN5Q96P11 429 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 RANBP9Q96S59 729 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ALKBH7Q9BT30 221 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 TMEM218A2RU14 115 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 C5orf49A4QMS7 147 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 STC2O76061 302 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CLDN15P56746 228 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 SSPNQ14714 243 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 SLC5A12Q1EHB4 618 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PLAC9Q5JTB6 97 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 RTP2Q5QGT7 225 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 RNF113BQ8IZP6 322 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 PRSS35Q8N3Z0 413 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 LFNGQ8NES3 379 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 KAZALD1Q96I82 304 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ANKRD60Q9BZ19 345 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZNF840PA6NDX5 716 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PPP5D1E7EU14 171 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 E9PQ18 207 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PPM1DO15297 605 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 TOX3O15405 576 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 SMIM6P0DI80 62 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 DNAJB13P59910 316 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CPZQ66K79 652 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ACY3Q96HD9 319 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PAAF1Q9BRP4 392 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 DTLQ9NZJ0 730 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 TAAR3PQ9P1P4 343 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZNF391Q9UJN7 358 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 C10orf71Q711Q0 1435 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 TISP43B9A030 160 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 IGHV3-9P01782 118 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR1C1Q15619 314 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FAM27D1Q5T7N8 215 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 NCBP2-AS2Q69YL0 99 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR4S1Q8NGB4 309 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 AJAP1Q9UKB5 411 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 TMED3Q9Y3Q3 217 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 COL9A1P20849 921 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CALCRP30988 508 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CMC4P56277 68 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 KLF3P57682 345 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 ABI3BPQ7Z7G0 1075 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 AMIGO3Q86WK7 504 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 VSTM2AQ8TAG5 236 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FAM213BQ8TBF2 198 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 BIRC8Q96P09 236 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 MAGT1Q9H0U3 335 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 SF3B6Q9Y3B4 125 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 POLR2AP24928 1970 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 A0A0D9SEW6 157 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 E5RGE8 158 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 DNAL4O96015 105 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 RPLP1P05386 114 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 HTR2CP28335 458 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 METAP1P53582 386 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR5M9Q8NGP3 310 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR1L3Q8NH93 324 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PHLDA1Q8WV24 401 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 PIGTQ969N2 578 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 RAB37Q96AX2 223 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 C20orf27Q9GZN8 174 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 TP63Q9H3D4 680 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 SIRT7Q9NRC8 400 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 DHCR7Q9UBM7 475 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 HRH3Q9Y5N1 445 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 LMTK2Q8IWU2 1503 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FAM183AA6NL82 134 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 MMP7P09237 267 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 APEHP13798 732 aaKnown RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 SSTR2P30874 369 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OPRK1P41145 380 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CDKN2BP42772 138 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZNF83P51522 516 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FAM109BQ6ICB4 259 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 ZDHHC23Q8IYP9 409 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 SHISA5Q8N114 240 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 BVESQ8NE79 360 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR6K3Q8NGY3 331 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 NEIL2Q969S2 332 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 BIRC7Q96CA5 298 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 SEH1LQ96EE3 360 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FOXQ1Q9C009 403 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 CRPP02741 224 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 C1SP09871 688 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 FBXO45P0C2W1 286 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 OR5AL1P0C617 328 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 PDLIM4P50479 330 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 INSM1Q01101 510 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 HLXQ14774 488 aaPredicted RBP3.14□□□□□ -1.91
NEB-201ENST00000172853 CLEC14AQ86T13 490 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms