RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Lrrn3Q8CBC6 707 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 D1Ertd622eQ8VEB3 207 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 Flvcr2Q91X85 551 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 NrarpQ91ZA8 114 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 Sfxn2Q925N2 322 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 Commd4Q9CQ02 199 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 Ropn1lQ9EQ00 218 aa13.21□□□□□ -0.29
Nup88-202ENSMUST00000108530 Zfp81B8JJZ7 531 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 CrnnD3YUU6 520 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adap1E9PY16 374 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm21812J3QN84 227 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rnase2bO35292 155 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 MgllO35678 303 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Igh-1aP01865 398 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cdh3P10287 822 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Bcl2l15Q08ED0 167 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp180Q6NZI9 655 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp157Q6PCM4 567 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1161Q7TR29 321 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Eif1axQ8BMJ3 144 aaKnown RBP13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp286Q8C0E6 519 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zbtb37Q8C3U9 504 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cml2Q8CHQ9 238 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cbx7Q8VDS3 158 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Glyr1Q922P9 546 aaKnown RBP13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ceacam13Q9DAT7 263 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Osbpl3Q9DBS9 855 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Lime1Q9EQR5 269 aa13.21□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm364A2AFI6 671 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1097A2AVA9 315 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1314A2AVL6 312 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm6576F6YTZ4 274 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Prdx6O08709 224 aaKnown RBP13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Hps1O08983 704 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pgam2O70250 253 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Jmjd7P0C872 316 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cox5aP12787 146 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Eif1P48024 113 aaKnown RBP13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ctsll3Q3ULP7 331 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 AccslQ3UX83 580 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp36l3Q5ISE2 725 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Anapc10Q8K2H6 185 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Izumo1Q9D9J7 397 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr887Q9EQA6 309 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 AcacaQ5SWU9 2345 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 FryE9Q8I9 3020 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp944E9PUS4 492 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm6465F7A7Y6 181 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm8906L7N2A2 181 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cox4i1P19783 169 aaKnown RBP13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Elk1P41969 429 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Atp5j2P56135 88 aaKnown RBP13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Jsrp1Q3MI48 332 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1500Q7TQQ3 311 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tgm4Q8BZH1 670 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 MetrnQ8C1Q4 291 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 CcnqQ8QZR8 250 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rab3bQ9CZT8 219 aa13.2□□□□□ -0.3
Nup88-202ENSMUST00000108530 PtprbB2RU80 1998 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Vmn2r76E9Q3F5 853 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm21915J3QPM7 133 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pcdh12O55134 1180 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Drd3P30728 446 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ctbp2P56546 445 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Crabp1P62965 137 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zp3rQ60736 579 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Znf354aQ61751 572 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Xkr8Q8C0T0 401 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 TbceQ8CIV8 524 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr54Q8VFE6 313 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr821Q8VG45 310 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pskh1Q91YA2 424 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Mettl18Q9CZ09 362 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 CsQ9CZU6 464 aaKnown RBP13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Serpinb7Q9D695 380 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tmem138Q9D6G5 162 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 FcrlsQ9EQY5 509 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Nfkb2Q9WTK5 899 aa13.19□□□□□ -0.3
Nup88-202ENSMUST00000108530 Trbv12-1A0A0B4J1H0 124 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rnpepl1G5E872 720 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Chrnb1P09690 501 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Irf1P15314 329 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Clk1P22518 483 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 SnrpbP27048 231 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cd28P31041 218 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 RidaP52760 135 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Slc12a3P59158 1002 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ppp3r1Q63810 170 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp975Q6NVD6 525 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Q80Y39 304 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adamts4Q8BNJ2 833 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rgs7bpQ8BQP9 257 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ttc36Q8VBW8 186 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1443Q8VFW8 312 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr642Q924X8 314 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Dmac2Q9D7K5 258 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tmem41aQ9D8U2 264 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Vmn1r172Q9EPS4 313 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Sorcs1Q9JLC4 1167 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Uchl1Q9R0P9 223 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms