RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 C10orf128Q5T292 105 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 NANOGP8Q6NSW7 305 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 RNF144BQ7Z419 303 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 SLC30A8Q8IWU4 369 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 MSRB3Q8IXL7 192 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 PAPD5Q8NDF8 572 aaKnown RBP11.36□□□□□ -0.59
SNX1-214ENST00000625244 BBS10Q8TAM1 723 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 SEPHS2Q99611 448 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 HOPXQ9BPY8 73 aaPredicted RBP11.36□□□□□ -0.59
SNX1-214ENST00000625244 MMADHCQ9H3L0 296 aaPredicted RBP11.36□□□□□ -0.59
SNX1-214ENST00000625244 NDE1Q9NXR1 346 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 ERVK-18Q9QC07 812 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 ANGPT4Q9Y264 503 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 A0A0B4J2E0 115 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 A0A1B0GX12 115 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 OR10H3O60404 316 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 FCN3O75636 299 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 MT-ATP6P00846 226 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
SNX1-214ENST00000625244 ZNF133P52736 654 aaPredicted RBP11.35□□□□□ -0.59
SNX1-214ENST00000625244 CDK6Q00534 326 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 SCARB2Q14108 478 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 LY6EQ16553 131 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
SNX1-214ENST00000625244 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 ALDH16A1Q8IZ83 802 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 C11orf65Q8NCR3 313 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 NPEPL1Q8NDH3 523 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 NOXO1Q8NFA2 376 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 NPRL2Q8WTW4 380 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 CLPTM1LQ96KA5 538 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 TMEM43Q9BTV4 400 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 SPATA5L1Q9BVQ7 753 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 TMEM38AQ9H6F2 299 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 TBCCD1Q9NVR7 557 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
SNX1-214ENST00000625244 F5H5P2 479 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 H3BUX3 64 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 NPFFO15130 113 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 MLNRO43193 412 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 NUDT7P0C024 238 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 CDH12P55289 794 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 DLX1P56177 255 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 OR1Q1Q15612 314 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 CDONQ4KMG0 1287 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 ERICH5Q6P6B1 374 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 ARL9Q6T311 187 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 HACD2Q6Y1H2 254 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 BTN2A1Q7KYR7 527 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 PNKDQ8N490 385 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 OR10A6Q8NH74 314 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 WIPF2Q8TF74 440 aaPredicted RBP11.34□□□□□ -0.59
SNX1-214ENST00000625244 NSMAFQ92636 917 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 MAL2Q969L2 176 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 IKZF5Q9H5V7 419 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 RANBP3Q9H6Z4 567 aaPredicted RBP11.34□□□□□ -0.59
SNX1-214ENST00000625244 KAT8Q9H7Z6 458 aaKnown RBP11.34□□□□□ -0.59
SNX1-214ENST00000625244 SELENONQ9NZV5 590 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
SNX1-214ENST00000625244 SLC13A4Q9UKG4 626 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
SNX1-214ENST00000625244 A0A1B0GVI7 797 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 FXYD1O00168 92 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 TPST2O60704 377 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SERPINB7O75635 380 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 TRMUO75648 421 aaKnown RBP11.33□□□□□ -0.6
SNX1-214ENST00000625244 CH25HO95992 272 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 PAHP00439 452 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 TUBG1P23258 451 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 LAP3P28838 519 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SLC35A2P78381 396 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 HABP2Q14520 560 aaPredicted RBP11.33□□□□□ -0.6
SNX1-214ENST00000625244 KRT72Q14CN4 511 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 ZNF74Q16587 644 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 RABL3Q5HYI8 236 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 NKAPLQ5M9Q1 402 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 FAM27BQ5VT28 67 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 CRIP3Q6Q6R5 217 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 C16orf89Q6UX73 402 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 OR13G1Q8NGZ3 307 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SLC26A7Q8TE54 656 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 PTP4A1Q93096 173 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
SNX1-214ENST00000625244 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 BCL2L10Q9HD36 194 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SPAG4Q9NPE6 437 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 TUBG2Q9NRH3 451 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 DNAJB11Q9UBS4 358 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
SNX1-214ENST00000625244 A0A1W2PRX2 142 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms