RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MCFD2Q8NI22 146 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 SNX33Q8WV41 574 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 ZNF75AQ96N20 296 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 FOXB1Q99853 325 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 ZNF747Q9BV97 191 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 TMPRSS13Q9BYE2 586 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 ULBP2Q9BZM5 246 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 AMBNQ9NP70 447 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 A4GALTQ9NPC4 353 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 CNOT2Q9NZN8 540 aaKnown RBP6.68□□□□□ -1.34
CLK1-215ENST00000621181 FBXL3Q9UKT7 428 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 LSM2Q9Y333 95 aaKnown RBP6.68□□□□□ -1.34
CLK1-215ENST00000621181 IFT52Q9Y366 437 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 ARHGAP32A7KAX9 2087 aa6.68□□□□□ -1.34
CLK1-215ENST00000621181 LOC102725191A0A1B0GVB3 256 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 C17orf100A8MU93 164 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 J3QLI3 93 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 M0R129 80 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 ATP6V1G1O75348 118 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 SERPINI2O75830 405 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 MFN2O95140 757 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 UBL3O95164 117 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 GASTP01350 101 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 IFNA14P01570 189 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 FAM157BP0CG42 384 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 HLA-DOBP13765 273 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 SNRPBP14678 240 aaKnown RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 GATA3P23771 443 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 FPR2P25090 351 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 KLF3P57682 345 aaPredicted RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 SNRPGP62308 76 aaKnown RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 UBA52P62987 128 aaKnown RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 ST3GAL4Q11206 333 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 ZP4Q12836 540 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 CAMK2DQ13557 499 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 PTGES3Q15185 160 aaKnown RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 ALG10BQ5I7T1 473 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 RNLSQ5VYX0 342 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 ZNF367Q7RTV3 350 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 C20orf196Q8IYI0 205 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 ZDHHC22Q8N966 263 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 TAAR8Q969N4 342 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 TMEM19Q96HH6 336 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 LRR1Q96L50 414 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 CENPOQ9BU64 300 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 OR51E2Q9H255 320 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 OR51B6Q9H340 312 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 SP140LQ9H930 580 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 HINT3Q9NQE9 182 aaKnown RBP6.67□□□□□ -1.34
CLK1-215ENST00000621181 DECR2Q9NUI1 292 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 MED29Q9NX70 200 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 ZNF224Q9NZL3 707 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 TAAR3PQ9P1P4 343 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLK1-215ENST00000621181 CHST2Q9Y4C5 530 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
CLK1-215ENST00000621181 TRAV36DV7A0A075B6V5 113 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 IGHV1-69-2A0A0G2JMI3 117 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 A0A0G2JPF8 293 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 TRBV4-1A0A0J9YWV2 114 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 EFCAB10A6NFE3 127 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ZNF726A6NNF4 738 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 HNRNPCL2B2RXH8 293 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 HNRNPCL3B7ZW38 293 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 CCNB2O95067 398 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SERPINA5P05154 406 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 HNRNPCL4P0DMR1 293 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 HKR1P10072 659 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 AHCYP23526 432 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 GSSP48637 474 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 CRISP1P54107 249 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 UGT2B15P54855 530 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 PUDPQ08623 228 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SEC23BQ15437 767 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SSX1Q16384 188 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ZNF181Q2M3W8 571 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 HFEQ30201 348 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 PCGF3Q3KNV8 242 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ARMCX4Q5H9R4 360 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SLX4IPQ5VYV7 408 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 C12orf73Q69YU5 71 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 REEP3Q6NUK4 255 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ZNF627Q7L945 461 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 CCDC190Q86UF4 302 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 AQP11Q8NBQ7 271 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 CHAC2Q8WUX2 184 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 DNAJA4Q8WW22 397 aaPredicted RBP6.66□□□□□ -1.34
CLK1-215ENST00000621181 TIMD4Q96H15 378 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 DUX5Q96PT3 197 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 OR5M11Q96RB7 305 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SDHCQ99643 169 aaPredicted RBP6.66□□□□□ -1.34
CLK1-215ENST00000621181 GAL3ST1Q99999 423 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 WFDC6Q9BQY6 131 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ASPNQ9BXN1 380 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 RNF167Q9H6Y7 350 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SAP30LQ9HAJ7 183 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 NMNAT1Q9HAN9 279 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms