RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 OR2G3Q8NGZ4 309 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 GSTP1P09211 210 aaKnown RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 IGFBP4P22692 258 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 ZNF660Q6AZW8 331 aaPredicted RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 PAPOLGQ9BWT3 736 aaKnown RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 CUTCQ9NTM9 273 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 C9J4A7 227 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 PHF1O43189 567 aaPredicted RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 TRAPPC6AO75865 159 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 CNOT4O95628 575 aaKnown RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 TBXA2RP21731 343 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 RPS18P62269 152 aaKnown RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 GABREP78334 506 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 SRPXP78539 464 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 SHISA6Q6ZSJ9 500 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 LINC00518Q8N0U6 118 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 FRZBQ92765 325 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 CPNE4Q96A23 557 aaPredicted RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 TOLLIPQ9H0E2 274 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 TXNIPQ9H3M7 391 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 MRM2Q9UI43 246 aaKnown RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 FLVCR1Q9Y5Y0 555 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 POM121BA6NF01 834 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 LILRB5O75023 590 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 TMEM182Q6ZP80 229 aaPredicted RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 MMP25Q9NPA2 562 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 SPTBP11277 2137 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 DUS4LO95620 317 aaKnown RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 TK1P04183 234 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 GP1BAP07359 652 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 PHLDA2Q53GA4 152 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 H1FNTQ75WM6 255 aaPredicted RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 MRPL41Q8IXM3 137 aaKnown RBP13.23□□□□□ -0.29
VPS36-207ENST00000611132 OR51A4Q8NGJ6 313 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
VPS36-207ENST00000611132 AKR7A3O95154 331 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 VSIG10L2P0DP72 767 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 OR6S1Q8NH40 331 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 E5RGE8 158 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 DPP4P27487 766 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 FAM74A3Q4VXF1 159 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZNF425Q6IV72 752 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 MISPQ8IVT2 679 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZNF251Q9BRH9 671 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 LAT2Q9GZY6 243 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZCCHC4Q9H5U6 513 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 MED9Q9NWA0 146 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 NSG2Q9Y328 171 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZNF136P52737 540 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 DVL1P1P54792 670 aaPredicted RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZNF239Q16600 458 aaKnown RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 USB1Q9BQ65 265 aaKnown RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 ZNF2Q9BSG1 426 aaPredicted RBP13.22□□□□□ -0.29
VPS36-207ENST00000611132 CST4P01036 141 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 CRYBA1P05813 215 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 FOLR1P15328 257 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 PPICP45877 212 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 DCAF12L2Q5VW00 463 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 NPEPL1Q8NDH3 523 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 PGLYRP3Q96LB9 341 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 MAP3K3Q99759 626 aa13.22□□□□□ -0.29
VPS36-207ENST00000611132 KLK3P07288 261 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 ADRA2AP08913 450 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 SMIM6P0DI80 62 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 BTG2P78543 158 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 MLF2Q15773 248 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 VN1R4Q7Z5H5 301 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 NINJ1Q92982 152 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 HHIPQ96QV1 700 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 SEC11CQ9BY50 192 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 FLRT3Q9NZU0 649 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 FRRS1LQ9P0K9 344 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 WASF3Q9UPY6 502 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 MMACHCQ9Y4U1 282 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 RGPD3A6NKT7 1758 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 RGPD4Q7Z3J3 1758 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 LTBP1Q14766 1721 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms