RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SPARCP09486 303 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 RAC2P15153 192 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 KITLGP21583 273 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 ACHEP22303 614 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 GGTLC2Q14390 218 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 PTGES3Q15185 160 aaKnown RBP14.25□□□□□ -0.13
SSBP4-213ENST00000602088 TMEM249Q2WGJ8 235 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 KDM4DQ6B0I6 523 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 PLBD1Q6P4A8 553 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 FBXW12Q6X9E4 464 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 NAA40Q86UY6 237 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 CPOQ8IVL8 374 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 PYDC1Q8WXC3 89 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 YIPF5Q969M3 257 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 CMBLQ96DG6 245 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 CENPNQ96H22 339 aaPredicted RBP14.25□□□□□ -0.13
SSBP4-213ENST00000602088 PLEKHA8Q96JA3 519 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 TEX12Q9BXU0 123 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 OR51V1Q9H2C8 321 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 KRT84Q9NSB2 600 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
SSBP4-213ENST00000602088 PURGQ9UJV8 347 aaKnown RBP14.25□□□□□ -0.13
SSBP4-213ENST00000602088 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
SSBP4-213ENST00000602088 IGHV4-61A0A0C4DH41 118 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 PRODHO43272 600 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 TIMM8AO60220 97 aaPredicted RBP14.24□□□□□ -0.13
SSBP4-213ENST00000602088 MITFO75030 526 aaPredicted RBP14.24□□□□□ -0.13
SSBP4-213ENST00000602088 IGHV1-46P01743 117 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 GSTT1P30711 240 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
SSBP4-213ENST00000602088 TPTEP56180 551 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 FAM209AQ5JX71 171 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 DPY19L4Q7Z388 723 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 TIGD4Q8IY51 512 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 ST7LQ8TDW4 575 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 DIRC2Q96SL1 478 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 SEMA6AQ9H2E6 1030 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 CHODLQ9H9P2 273 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 TVP23BQ9NYZ1 205 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 PTTG3PQ9NZH4 202 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 ZDHHC8Q9ULC8 765 aa14.24□□□□□ -0.13
SSBP4-213ENST00000602088 M0R135 149 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 SPRY3O43610 288 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 CD5LO43866 347 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 RP2O75695 350 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 EPHA2P29317 976 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 CRYBB2P43320 205 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 TMEM33P57088 247 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 CDK5R2Q13319 367 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 HLXQ14774 488 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 SNAPC1Q16533 368 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 TSTQ16762 297 aaKnown RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ZMAT1Q5H9K5 638 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 CXXC5Q7LFL8 322 aaKnown RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ERI1Q8IV48 349 aaKnown RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 SPTSSAQ969W0 71 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 SLAMF6Q96DU3 332 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ZMYND19Q96E35 227 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF799Q96GE5 643 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 INTS14Q96SY0 518 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF275Q9NSD4 429 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 DECR2Q9NUI1 292 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 TMEFF2Q9UIK5 374 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-213ENST00000602088 OAZ3Q9UMX2 235 aa14.23□□□□□ -0.13
SSBP4-213ENST00000602088 SONP18583 2426 aaKnown RBP14.22□□□□□ -0.13
SSBP4-213ENST00000602088 H3BNX3 289 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 LILRA1O75019 489 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 LCATP04180 440 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 TACSTD2P09758 323 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 EIF2B1Q14232 305 aaKnown RBP14.22□□□□□ -0.13
SSBP4-213ENST00000602088 KLHL12Q53G59 568 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 SLC35D3Q5M8T2 416 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 ZFP1Q6P2D0 407 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 Q6ZR03 302 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 SHFQ7M4L6 423 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 BBS1Q8NFJ9 593 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 OR6N2Q8NGY6 317 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 CIB1Q99828 191 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 PKP2Q99959 881 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 ABHD6Q9BV23 337 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 SAP30LQ9HAJ7 183 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 CENPMQ9NSP4 180 aa14.22□□□□□ -0.13
SSBP4-213ENST00000602088 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 ZAR1LA6NP61 321 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF878C9JN71 531 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 TPD52L2O43399 206 aaKnown RBP14.21□□□□□ -0.13
SSBP4-213ENST00000602088 TLX2O43763 284 aaPredicted RBP14.21□□□□□ -0.13
SSBP4-213ENST00000602088 CDC14BO60729 498 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 CD55P08174 381 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 IGHV4-31P0DP07 118 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 SLC2A5P22732 501 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 IGFBP5P24593 272 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 PPP2R2BQ00005 443 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 SLX4IPQ5VYV7 408 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 OR2T2Q6IF00 324 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 DRAM2Q6UX65 266 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 USP51Q70EK9 711 aa14.21□□□□□ -0.13
SSBP4-213ENST00000602088 RHOUQ7L0Q8 258 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms