RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SLITRK2Q9H156 845 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 BRD7Q9NPI1 651 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 MALT1Q9UDY8 824 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 PRSS50Q9UI38 385 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 PHF3Q92576 2039 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 CTDSP2O14595 271 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 PDCD5O14737 125 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF32P17041 273 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF121P58317 390 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 GALK2Q01415 458 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 NDUFA5Q16718 116 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 UNQ6494/PRO21346Q6UXR6 183 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 Q8NA96 180 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 C9orf106Q8NAJ2 232 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 SPTSSAQ969W0 71 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 DHDHQ9UQ10 334 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 ZFHX4Q86UP3 3567 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 WDR1O75083 606 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 TTRP02766 147 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 BMP4P12644 408 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 MPGP29372 298 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 OTX1P32242 354 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 NR2C2APQ86WQ0 139 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 OR1F12Q8NHA8 337 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 ACOT12Q8WYK0 555 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 TMEM106AQ96A25 262 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 ZCCHC4Q9H5U6 513 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 SP140LQ9H930 580 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 TCF7L1Q9HCS4 588 aa15.46■□□□□ 0.07
SHKBP1-224ENST00000600718 LOC107986453A0A1B0GWG9 222 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 SYNGR3O43761 229 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 DOK2O60496 412 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 CD2P06729 351 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MMP7P09237 267 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 PLA2G5P39877 138 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 FOXG1P55316 489 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 PSG4Q00888 419 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 RSPO1Q2MKA7 263 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 SLC36A2Q495M3 483 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 CEP78Q5JTW2 689 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 C9orf135Q5VTT2 229 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MZT2AQ6P582 158 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 CISD2Q8N5K1 135 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 ASB5Q8WWX0 329 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 KCTD12Q96CX2 325 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 OR2H1Q9GZK4 316 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 CMAHPQ9Y471 501 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 A0A0G2JK05 382 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 ISPDA4D126 451 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MBD3L4A6NDZ8 208 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MBD3L3A6NE82 208 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MBD3L5A6NJ08 208 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 NOTOA8MTQ0 251 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 F5H5K5 113 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 P2RY10O00398 339 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 RGS5O15539 181 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 HOXD4P09016 255 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 ACSM4P0C7M7 580 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 ZNF774Q6NX45 483 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 SFXN4Q6P4A7 337 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 LUZP2Q86TE4 346 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 GCNT2Q8N0V5 402 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 OR6K3Q8NGY3 331 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 MBD3L2Q8NHZ7 208 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 FGFBP3Q8TAT2 258 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 ZCCHC14Q8WYQ9 949 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 CEP19Q96LK0 163 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 WNT5BQ9H1J7 359 aa15.45■□□□□ 0.06
SHKBP1-224ENST00000600718 LOC400499M0QZD8 3231 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 OR6C6A6NF89 314 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 FIGNL2A6NMB9 653 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 CNOT4O95628 575 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 TPOP07202 933 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 ANXA2P07355 339 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 PATE4P0C8F1 98 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 CRYGSP22914 178 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 KIR2DL2P43627 348 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 OR10A3P58181 314 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 IDNKQ5T6J7 187 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 ANKRD16Q6P6B7 361 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 TFAP2EQ6VUC0 442 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 STAC2Q6ZMT1 411 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 PRSS45Q7RTY3 260 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 DPPA2Q7Z7J5 298 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 OR13C3Q8NGS6 347 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 FAM57AQ8TBR7 257 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 ORAI1Q96D31 301 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 RNF121Q9H920 327 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 SLC17A5Q9NRA2 495 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 AK6Q9Y3D8 172 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 H3BSH0 61 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 M0R135 149 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 CD40LGP29965 261 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 TNFSF8P32971 234 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 PPP5CP53041 499 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 TPTEP56180 551 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 ZNF45Q02386 682 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 DDI2Q5TDH0 399 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 FAM57BQ71RH2 274 aa15.44■□□□□ 0.06
SHKBP1-224ENST00000600718 OR8B12Q8NGG6 310 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms