RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 OR4M2Q8NGB6 313 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 OR4Q3Q8NH05 313 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 GCDHQ92947 438 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 TMPRSS13Q9BYE2 586 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 ELOVL3Q9HB03 270 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 NTN4Q9HB63 628 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 PLEK2Q9NYT0 353 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 ASH2LQ9UBL3 628 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 KCNG2Q9UJ96 466 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 CLDN25C9JDP6 229 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 G3V2T6 193 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 DCTN6O00399 190 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 DOK2O60496 412 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 IGHV2-5P01817 119 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 HMGN1P05114 100 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 ZNF823P16415 610 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 BLVRAP53004 296 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 AVPI1Q5T686 147 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 ZDHHC13Q8IUH4 622 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 C3orf56Q8N813 242 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 CYB561A3Q8NBI2 242 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 SLC26A10Q8NG04 563 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 OR2AJ1Q8NGZ0 328 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 DDOQ99489 341 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 OR51B6Q9H340 312 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 CMC2Q9NRP2 79 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 DECR2Q9NUI1 292 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 ATPIF1Q9UII2 106 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 WIPI2Q9Y4P8 454 aa14.89□□□□□ -0.03
SHKBP1-203ENST00000594298 LOC100509620A0A075B734 347 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 RGS9O75916 674 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 TUBG1P23258 451 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 GATA3P23771 443 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 HTR5AP47898 357 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 SLC25A1P53007 311 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 ACTR3P61158 418 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 GINS1Q14691 196 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 HFEQ30201 348 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 FAM209AQ5JX71 171 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 ZNF362Q5T0B9 420 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 ZFP1Q6P2D0 407 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 USP51Q70EK9 711 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 VASH1Q7L8A9 365 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 HS3ST5Q8IZT8 346 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 OR1J1Q8NGS3 322 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 IPCEF1Q8WWN9 437 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 TIMD4Q96H15 378 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 C4orf45Q96LM5 186 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 DCLRE1CQ96SD1 692 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 SUCNR1Q9BXA5 334 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 FN3KQ9H479 309 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 SAP30LQ9HAJ7 183 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 TUBG2Q9NRH3 451 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 PAPOLBQ9NRJ5 636 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 ENOPH1Q9UHY7 261 aa14.88□□□□□ -0.03
SHKBP1-203ENST00000594298 EGR1P18146 543 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 FMO3P31513 532 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 ZNF81P51508 661 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 CRMP1Q14194 572 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 ZNF718Q3SXZ3 478 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 FAHD1Q6P587 224 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 ICA1LQ8NDH6 482 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 OR1F12Q8NHA8 337 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 NANPQ8TBE9 248 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 GTF3AQ92664 365 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 RAB1CQ92928 201 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 ELMOD3Q96FG2 381 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 CENPNQ96H22 339 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 COG8Q96MW5 612 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 HDHD2Q9H0R4 259 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 CACNG2Q9Y698 323 aa14.87□□□□□ -0.03
SHKBP1-203ENST00000594298 OR6C6A6NF89 314 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 TPD52L2O43399 206 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 ICMTO60725 284 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 GPANK1O95872 356 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 GCH1P30793 250 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 PYCR1P32322 319 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 MMP15P51511 669 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 ESRRGP62508 458 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 HIST1H3AP68431 136 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 ECH1Q13011 328 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 KPNB1Q14974 876 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 TSTQ16762 297 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 MEP1BQ16820 701 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 CCDC92Q53HC0 331 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 HIST2H3PS2Q5TEC6 136 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 DCAF12L2Q5VW00 463 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 HIST2H3AQ71DI3 136 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 PARP8Q8N3A8 854 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 IQCF1Q8N6M8 205 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 OR9Q1Q8NGQ5 310 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 LRTOMTQ8WZ04 291 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 PLEKHA8Q96JA3 519 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 COQ7Q99807 217 aa14.86□□□□□ -0.03
SHKBP1-203ENST00000594298 NMNAT2Q9BZQ4 307 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms