RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ANKRD16Q6P6B7 361 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ELMOD2Q8IZ81 293 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 OR1K1Q8NGR3 316 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 TBC1D15Q8TC07 691 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 NXF2Q9GZY0 626 aaKnown RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 PBOV1Q9GZY1 135 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 TPK1Q9H3S4 243 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 BRD7Q9NPI1 651 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 A3GALT2U3KPV4 340 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 SHANK1Q9Y566 2161 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ARPC4-TTLL3A0A0A6YYG9 625 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ACOD1A6NK06 481 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 CASKO14936 926 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 PIN1P1O15428 100 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 TTRP02766 147 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 OCM2P0CE71 109 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 UBCP0CG48 685 aaKnown RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 TMIGD3P0DMS9 266 aaPredicted RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 MAPK3P27361 379 aaPredicted RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 ZNF404Q494X3 552 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ZNF704Q6ZNC4 412 aaPredicted RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 PRSS45Q7RTY3 260 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 BTLAQ7Z6A9 289 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 DOLPP1Q86YN1 238 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ZNF283Q8N7M2 679 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 OR1F12Q8NHA8 337 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 AKR7LQ8NHP1 331 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 STARD4Q96DR4 205 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 NOX4Q9NPH5 578 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 TRAV1-2A0A0B4J238 106 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 A0A1W2PPK0 400 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 SLC19A2O60779 497 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 CGAP01215 116 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 IL2RAP01589 272 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 SFTPCP11686 197 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 MYL9P24844 172 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 RORCP51449 518 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 KRTAP27-1Q3LI81 207 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 C3P1Q6ZMU1 363 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 NAXEQ8NCW5 288 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 MCFD2Q8NI22 146 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 SLC7A6Q92536 515 aa18.17■□□□□ 0.5
PNKP-203ENST00000593946 BCL2L2Q92843 193 aaPredicted RBP18.17■□□□□ 0.5
PNKP-203ENST00000593946 TRBV5-7A0A0A0MS05 114 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 LOC107986453A0A1B0GWG9 222 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 F5H5K5 113 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 M0R135 149 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 APOC1P02654 83 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 SLC2A1P11166 492 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 ACHEP22303 614 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 IGHV1-2P23083 117 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 CEACAM8P31997 349 aaPredicted RBP18.16■□□□□ 0.5
PNKP-203ENST00000593946 HNRNPA0Q13151 305 aaKnown RBP18.16■□□□□ 0.5
PNKP-203ENST00000593946 HSD17B12Q53GQ0 312 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 TMEM244Q5VVB8 128 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 TPRA1Q86W33 373 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 THRSPQ92748 146 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 SPTSSAQ969W0 71 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 ZNF799Q96GE5 643 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 MMP27Q9H306 513 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 SLC17A5Q9NRA2 495 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 ATPIF1Q9UII2 106 aa18.16■□□□□ 0.5
PNKP-203ENST00000593946 ZNF503-AS2A6NEH8 195 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 HLA-HP01893 362 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 RAF1P04049 648 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 DBHP09172 617 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 ACSM4P0C7M7 580 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 EDN3P14138 238 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 COX5AP20674 150 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 SOX2P48431 317 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 TGFBR3Q03167 851 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 PABPC1L2AQ5JQF8 200 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 OR8B12Q8NGG6 310 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 TMEM106AQ96A25 262 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 SLC24A3Q9HC58 644 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 HHLA2Q9UM44 414 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 PROCRQ9UNN8 238 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 SMIM30A4D0T7 59 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 H3BSH0 61 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 GLI4P10075 376 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 ANOS1P23352 680 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 HTR5AP47898 357 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 LINC00299Q6ZSB3 139 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 DPPA2Q7Z7J5 298 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 NR2C2APQ86WQ0 139 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 GABRG1Q8N1C3 465 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 TSEN15Q8WW01 171 aaKnown RBP18.15■□□□□ 0.5
PNKP-203ENST00000593946 ASB5Q8WWX0 329 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 RNF121Q9H920 327 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 ZNF319Q9P2F9 582 aa18.15■□□□□ 0.5
PNKP-203ENST00000593946 PLEKHB1Q9UF11 243 aaPredicted RBP18.15■□□□□ 0.5
PNKP-203ENST00000593946 TTLL8A6PVC2 850 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 P2RY10O00398 339 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 ANXA2P07355 339 aaKnown RBP18.14■□□□□ 0.49
PNKP-203ENST00000593946 SRMP19623 302 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 SLC6A9P48067 706 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 CAV3P56539 151 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 TBRG1Q3YBR2 411 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 HIKESHIQ53FT3 197 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 DRAM2Q6UX65 266 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms