RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 APOBEC3DQ96AK3 386 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-202ENST00000593764 ATF6BQ99941 703 aa15.69■□□□□ 0.1
SHKBP1-202ENST00000593764 C1QTNF5Q9BXJ0 243 aa15.69■□□□□ 0.1
SHKBP1-202ENST00000593764 WDR76Q9H967 626 aa15.69■□□□□ 0.1
SHKBP1-202ENST00000593764 COMMD3-BMI1R4GMX3 469 aa15.69■□□□□ 0.1
SHKBP1-202ENST00000593764 ZNF823P16415 610 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 ECH1Q13011 328 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 PCK2Q16822 640 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 CHRFAM7AQ494W8 412 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 LINC01590Q5TEZ4 76 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 ACSM5Q6NUN0 579 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 OR5L1Q8NGL2 311 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 TEX47Q8TBZ9 253 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 DIRC2Q96SL1 478 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 HCAR1Q9BXC0 346 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 NARFLQ9H6Q4 476 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 YY1AP1Q9H869 796 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 PTTG3PQ9NZH4 202 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 ATRQ13535 2644 aa15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 FBN1P35555 2871 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-202ENST00000593764 F5H5K5 113 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 H3BN98 237 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 E2F6O75461 281 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 ATP5HO75947 161 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 IFNGP01579 166 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 FMO3P31513 532 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 GRK5P34947 590 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 RASSF2P50749 326 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 CDH15P55291 814 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 LMO4P61968 165 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 ZMAT1Q5H9K5 638 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 LINC01356Q8N9X3 169 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 UTP4Q969X6 686 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 ELMOD3Q96FG2 381 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 EGLN1Q9GZT9 426 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 MED20Q9H944 212 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 DDX28Q9NUL7 540 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 TREM2Q9NZC2 230 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 CDC42EP3Q9UKI2 254 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 KCNS2Q9ULS6 477 aa15.67■□□□□ 0.1
SHKBP1-202ENST00000593764 MXRA5Q9NR99 2828 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 FAM183AA6NL82 134 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 RIIAD1A6NNX1 92 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 TIPRLO75663 272 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 OSMP13725 252 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 ANXA8P13928 327 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 ZNF3P17036 446 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 OTX1P32242 354 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 TNFAIP6P98066 277 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 CDK5Q00535 292 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 HNRNPA0Q13151 305 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 HFEQ30201 348 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 TEX30Q5JUR7 227 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 AVPI1Q5T686 147 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 OR2T2Q6IF00 324 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 DCXRQ7Z4W1 244 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 CCL17Q92583 94 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 WIPI2Q9Y4P8 454 aa15.66■□□□□ 0.1
SHKBP1-202ENST00000593764 FAM157AC9JC47 383 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 ZNF593O00488 134 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 ANOS1P23352 680 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 POU1F1P28069 291 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 RBMXP38159 391 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 ENTPD1P49961 510 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 MVKQ03426 396 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 GINS1Q14691 196 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 FAM120AOSQ5T036 256 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 SLC27A4Q6P1M0 643 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 SHQ1Q6PI26 577 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 OR5AS1Q8N127 324 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 OR2Z1Q8NG97 314 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 NRBF2Q96F24 287 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 BEX2Q9BXY8 128 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 MMADHCQ9H3L0 296 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 ZNF556Q9HAH1 456 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 DCAF16Q9NXF7 216 aa15.65■□□□□ 0.1
SHKBP1-202ENST00000593764 IQCF6A8MYZ5 107 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 B4DSR2 109 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 CLDN25C9JDP6 229 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 M0R135 149 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 LCATP04180 440 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 SPARCP09486 303 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 FAM157CP0CG43 387 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 TPTEP56180 551 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 GK2Q14410 553 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 OR8G5Q8NG78 346 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 OR6K6Q8NGW6 343 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 ST7LQ8TDW4 575 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 ZNF799Q96GE5 643 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 SHARPINQ9H0F6 387 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 LPAR3Q9UBY5 353 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 IL19Q9UHD0 177 aa15.64■□□□□ 0.09
SHKBP1-202ENST00000593764 DYSFO75923 2080 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 A0A1B0GWJ7 208 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 C5orf63A6NC05 138 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 SURF4O15260 269 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 DEAF1O75398 565 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 DAPP51397 102 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 BLVRAP53004 296 aa15.63■□□□□ 0.09
SHKBP1-202ENST00000593764 PRSS12P56730 875 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms