RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CAB39Q9Y376 341 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-214ENST00000592186 FREM1Q5H8C1 2179 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 LOC100509620A0A075B734 347 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 IGHV1-18A0A0C4DH31 117 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 TMEM129A0AVI4 362 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 C5orf49A4QMS7 147 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 VSTM5A8MXK1 200 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 F5H5K5 113 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 C19orf84I3L1E1 186 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ICMTO60725 284 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 MT-ND5P03915 603 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 CECR9P0C854 216 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 LIMS3P0CW19 117 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 LIMS4P0CW20 117 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 RNF224P0DH78 156 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 SMIM18P0DKX4 95 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF35P13682 527 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 OTX1P32242 354 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-214ENST00000592186 RAD52P43351 418 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 NAAAQ02083 359 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF85Q03923 595 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 NDUFA5Q16718 116 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 KRTAP27-1Q3LI81 207 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF684Q5T5D7 378 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 SP5Q6BEB4 398 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF584Q8IVC4 421 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 KLHL36Q8N4N3 616 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 YIPF7Q8N8F6 280 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 OR5L1Q8NGL2 311 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 OR10S1Q8NGN2 331 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 OR52N1Q8NH53 320 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 AMELYQ99218 206 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ALG8Q9BVK2 526 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 NOX3Q9HBY0 568 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 SLCO1C1Q9NYB5 712 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 CRIM1Q9NZV1 1036 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 ERVK-18Q9QC07 812 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 COPS3Q9UNS2 423 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 SNX5Q9Y5X3 404 aa9.26□□□□□ -0.93
SMAD4-214ENST00000592186 TMEM269A0A1B0GVZ9 245 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 DPRXA6NFQ7 191 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 TRIM64A6NGJ6 449 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 J3QLW9 94 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 MYL12BO14950 172 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 TPD52L2O43399 206 aaKnown RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 CLDN1O95832 211 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 CD3EP07766 207 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 PSKH1P11801 424 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 COX6B1P14854 86 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF19P17023 458 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 CCNOP22674 350 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 C21orf33P30042 268 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 ETV1P50549 477 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 MMP16P51512 607 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 GBX2P52951 348 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 RSPO1Q2MKA7 263 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF829Q3KNS6 432 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 CCDC58Q4VC31 144 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 NCMAPQ5T1S8 102 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 LRRN1Q6UXK5 716 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 SPATC1Q76KD6 591 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 NANOGP1Q8N7R0 232 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 OR52H1Q8NGJ2 320 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 PLPPR2Q96GM1 343 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 C4orf45Q96LM5 186 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 ZNF649Q9BS31 505 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 RHNO1Q9BSD3 238 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 BCL2L14Q9BZR8 327 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 PAK1IP1Q9NWT1 392 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 BABAM2Q9NXR7 383 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 NPAP1Q9NZP6 1156 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 MRM2Q9UI43 246 aaKnown RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 GNG8Q9UK08 70 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 GRIP1Q9Y3R0 1128 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 LRP12Q9Y561 859 aa9.25□□□□□ -0.93
SMAD4-214ENST00000592186 DIDO1Q9BTC0 2240 aaKnown RBP9.25□□□□□ -0.93
SMAD4-214ENST00000592186 ADGRG4Q8IZF6 3080 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 DOPEY1Q5JWR5 2465 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 PCNX1Q96RV3 2341 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 IGHV2OR16-5A0A0B4J2B6 119 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 M0R135 149 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 ABHD16AO95870 558 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 CLPTM1O96005 669 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 CELA3BP08861 270 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 ACSM4P0C7M7 580 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 NR4A1P22736 598 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 SLC6A9P48067 706 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 CX3CR1P49238 355 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 PRKXP51817 358 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 UCP2P55851 309 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 OR12D2P58182 307 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 MVKQ03426 396 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 BSPH1Q075Z2 132 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 SNTB1Q13884 538 aaKnown RBP9.24□□□□□ -0.93
SMAD4-214ENST00000592186 IRF3Q14653 427 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 LIPNQ5VXI9 398 aa9.24□□□□□ -0.93
SMAD4-214ENST00000592186 FDX2Q6P4F2 183 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms