RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CD28P10747 220 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 CD33P20138 364 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 IDH3AP50213 366 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 RAD23AP54725 363 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 CDK6Q00534 326 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 GUCA2AQ02747 115 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 EGFEM1PQ0D2K5 195 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 LRIF1Q5T3J3 769 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 OR2T2Q6IF00 324 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 CRIP3Q6Q6R5 217 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 PCYOX1LQ8NBM8 494 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 ZNF582Q96NG8 517 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 RAD21L1Q9H4I0 556 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 U3KQK5 164 aa11.32□□□□□ -0.6
CSNK1D-219ENST00000581660 TRBV5-3A0A0A0MS03 114 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 E9PQ18 207 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 BLOC1S5-TXNDC5H3BN57 136 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 LGALS8O00214 317 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 ADAM20O43506 726 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 NDUFA2O43678 99 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 FAM20BO75063 409 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 PAHP00439 452 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 THY1P04216 161 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 MSR1P21757 451 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 MSX2P35548 267 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 HTR5AP47898 357 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 CD47Q08722 323 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 MAB21L1Q13394 359 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 KLHL22Q53GT1 634 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 ZBTB37Q5TC79 503 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 REEP3Q6NUK4 255 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 CLDN22Q8N7P3 220 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 BEND2Q8NDZ0 799 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 RASD2Q96D21 266 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 CLPTM1LQ96KA5 538 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 MCHR1Q99705 422 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 ALG12Q9BV10 488 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 RAB18Q9NP72 206 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 RPUSD1Q9UJJ7 312 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-219ENST00000581660 ELOVL7A1L3X0 281 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 IQCF6A8MYZ5 107 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 H3BUX3 64 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 M0R3H8 397 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 DOK2O60496 412 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 TSPAN19P0C672 248 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 UMPSP11172 480 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 H2AFXP16104 143 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 CD200P41217 278 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 STX1BP61266 288 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SCRN3Q0VDG4 424 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SCARB2Q14108 478 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SELPLGQ14242 412 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 AGKQ53H12 422 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SLC30A8Q8IWU4 369 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SMYD1Q8NB12 490 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 FNDC8Q8TC99 324 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SERTAD4Q9NUC0 356 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 SLC13A4Q9UKG4 626 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 HERC2O95714 4834 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 STARD9Q9P2P6 4700 aa11.3□□□□□ -0.6
CSNK1D-219ENST00000581660 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 SGCEO43556 437 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 SAA4P35542 130 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 AQP2P41181 271 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 RGS6P49758 472 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 HOXA4Q00056 320 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 NPTX1Q15818 432 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 DLEU7Q6UYE1 221 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 Q8N2B8 174 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 C7orf26Q96N11 449 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 RBP7Q96R05 134 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 ECSITQ9BQ95 431 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 CPPED1Q9BRF8 314 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 MEPEQ9NQ76 525 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-219ENST00000581660 POLE4Q9NR33 117 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms