RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MPIG6BO95866 241 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 TNFRSF1BP20333 461 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 RBM34P42696 430 aaKnown RBP10.05□□□□□ -0.8
PRPF8-208ENST00000573716 RAP1BP61224 184 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 VSNL1P62760 191 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 RAP1AP62834 184 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 COX10Q12887 443 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 KCNJ8Q15842 424 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 FBXW12Q6X9E4 464 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 C1orf122Q6ZSJ8 110 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 BTN2A1Q7KYR7 527 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 PATL1Q86TB9 770 aaKnown RBP10.05□□□□□ -0.8
PRPF8-208ENST00000573716 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 GALNT4Q8N4A0 578 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 OR1F12Q8NHA8 337 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 TAMM41Q96BW9 452 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 RASD2Q96D21 266 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 TMEM109Q9BVC6 243 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 SH3GLB1Q9Y371 365 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 CAB39Q9Y376 341 aaPredicted RBP10.05□□□□□ -0.8
PRPF8-208ENST00000573716 MED31Q9Y3C7 131 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
PRPF8-208ENST00000573716 OR10H3O60404 316 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 FSTL3O95633 263 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 PAHP00439 452 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 IFI30P13284 250 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 RGS6P49758 472 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 MTPNP58546 118 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 MPPED2Q15777 294 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 AGKQ53H12 422 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 INTS11Q5TA45 600 aaKnown RBP10.04□□□□□ -0.8
PRPF8-208ENST00000573716 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-208ENST00000573716 PCYOX1LQ8NBM8 494 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 OR51A7Q8NH64 312 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 AENQ8WTP8 325 aaKnown RBP10.04□□□□□ -0.8
PRPF8-208ENST00000573716 ST8SIA4Q92187 359 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 APOBEC3DQ96AK3 386 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-208ENST00000573716 ECSITQ9BQ95 431 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 HCAR1Q9BXC0 346 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 RIMS3Q9UJD0 308 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
PRPF8-208ENST00000573716 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 OR6C6A6NF89 314 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 IQCF6A8MYZ5 107 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 LGALS8O00214 317 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 POLR3GO15318 223 aaPredicted RBP10.03□□□□□ -0.8
PRPF8-208ENST00000573716 XPNPEP2O43895 674 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 GYPAP02724 150 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 TSPAN19P0C672 248 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 EEF1B2P24534 225 aaKnown RBP10.03□□□□□ -0.8
PRPF8-208ENST00000573716 WDR4P57081 412 aaKnown RBP10.03□□□□□ -0.8
PRPF8-208ENST00000573716 POU4F2Q12837 409 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 MAB21L1Q13394 359 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 AQP6Q13520 282 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 PIN1Q13526 163 aaPredicted RBP10.03□□□□□ -0.8
PRPF8-208ENST00000573716 SELPLGQ14242 412 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 CLEC12AQ5QGZ9 265 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 BEND6Q5SZJ8 279 aaPredicted RBP10.03□□□□□ -0.8
PRPF8-208ENST00000573716 KLHDC1Q8N7A1 406 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 PHF21AQ96BD5 680 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 WACQ9BTA9 647 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 SIRT7Q9NRC8 400 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 FBLN5Q9UBX5 448 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 HIF3AQ9Y2N7 669 aa10.03□□□□□ -0.8
PRPF8-208ENST00000573716 XKRYO14609 159 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 DVL1O14640 695 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 RER1O15258 196 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 OR5F1O95221 314 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 RPL4P36578 427 aaKnown RBP10.02□□□□□ -0.81
PRPF8-208ENST00000573716 GATA4P43694 442 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 KLRD1Q13241 179 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 OR8G1Q15617 311 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 CCDC92Q53HC0 331 aaPredicted RBP10.02□□□□□ -0.81
PRPF8-208ENST00000573716 ZBTB37Q5TC79 503 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 DHDDSQ86SQ9 333 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 OR4S1Q8NGB4 309 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 OR4C13Q8NGP0 309 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 Q8TCH9 128 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 LIPHQ8WWY8 451 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 ERGIC1Q969X5 290 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 BPIFA2Q96DR5 249 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 ZNF583Q96ND8 569 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 CNTD2Q9H8S5 307 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 GRHPRQ9UBQ7 328 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 GMEB1Q9Y692 573 aa10.02□□□□□ -0.81
PRPF8-208ENST00000573716 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
PRPF8-208ENST00000573716 IGHV3OR15-7A0A075B7D8 119 aa10.01□□□□□ -0.81
PRPF8-208ENST00000573716 TRAV38-1A0A0B4J264 116 aa10.01□□□□□ -0.81
PRPF8-208ENST00000573716 A0A1B0GVI7 797 aa10.01□□□□□ -0.81
PRPF8-208ENST00000573716 hCG_1807616A0A1W2PRN6 198 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms