RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZNF121P58317 390 aaPredicted RBP16.03■□□□□ 0.16
SMPD3-211ENST00000568373 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 PNPLA2Q96AD5 504 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 PHF21AQ96BD5 680 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 INTS12Q96CB8 462 aaKnown RBP16.03■□□□□ 0.16
SMPD3-211ENST00000568373 FOXRED1Q96CU9 486 aaPredicted RBP16.03■□□□□ 0.16
SMPD3-211ENST00000568373 GHITMQ9H3K2 345 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 ZFP64Q9NPA5 681 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 FOXD3Q9UJU5 478 aaPredicted RBP16.03■□□□□ 0.16
SMPD3-211ENST00000568373 PCNX2A6NKB5 2137 aa16.02■□□□□ 0.16
SMPD3-211ENST00000568373 A0A1B0GTI1 187 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 A0A1B0GVI7 797 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 PINLYPA6NC86 204 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 TRAPPC6AO75865 159 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 KDM4BO94953 1096 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 H2AFB2P0C5Z0 115 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 CARD18P57730 90 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 GRB2P62993 217 aaKnown RBP16.02■□□□□ 0.15
SMPD3-211ENST00000568373 TCF15Q12870 199 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 TMEM255AQ5JRV8 349 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 OLFML2AQ68BL7 652 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 OR1J2Q8NGS2 313 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 OR51E1Q8TCB6 317 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 ADAT3Q96EY9 351 aaPredicted RBP16.02■□□□□ 0.15
SMPD3-211ENST00000568373 ACTR6Q9GZN1 396 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 ING3Q9NXR8 418 aa16.02■□□□□ 0.15
SMPD3-211ENST00000568373 DHHO43323 396 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 GDF1P27539 372 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 BDKRB2P30411 391 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 GNALP38405 381 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 CD96P40200 585 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 CX3CR1P49238 355 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 FOXO1Q12778 655 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 WIPI1Q5MNZ9 446 aaPredicted RBP16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ELFN2Q5R3F8 820 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 SPINK14Q6IE38 97 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF813Q6ZN06 617 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ADGRE4PQ86SQ3 457 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 NOXA1Q86UR1 476 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 OR8B12Q8NGG6 310 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 OR56B4Q8NH76 319 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ADAMTS17Q8TE56 1095 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 NABP1Q96AH0 204 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 RNF170Q96K19 258 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 FAM117AQ9C073 453 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ATG5Q9H1Y0 275 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 MUC6Q6W4X9 2439 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 TRAV18A0A075B6X5 111 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 H7C417 338 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ATP6V1G1O75348 118 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 TNFSF15O95150 251 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 SLC2A1P11166 492 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 MRPS15P82914 257 aaKnown RBP16.01■□□□□ 0.15
SMPD3-211ENST00000568373 DCAF10Q5QP82 559 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 ABHD17BQ5VST6 288 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 SFRP4Q6FHJ7 346 aaPredicted RBP16.01■□□□□ 0.15
SMPD3-211ENST00000568373 C20orf196Q8IYI0 205 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 PRSS33Q8NF86 280 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 OR5D14Q8NGL3 314 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 CAPSLQ8WWF8 208 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 SORCS2Q96PQ0 1159 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 C20orf85Q9H1P6 137 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 TMEM138Q9NPI0 162 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 MTFP1Q9UDX5 166 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 BOKQ9UMX3 212 aaPredicted RBP16.01■□□□□ 0.15
SMPD3-211ENST00000568373 RHBDD3Q9Y3P4 386 aa16.01■□□□□ 0.15
SMPD3-211ENST00000568373 LDLRAD4O15165 306 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 RBBP9O75884 186 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 NEURL1O76050 574 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 GABRA1P14867 456 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 CTSSP25774 331 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 SPEM2Q0P670 501 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 ENDOGQ14249 297 aaKnown RBP16■□□□□ 0.15
SMPD3-211ENST00000568373 GSG1Q2KHT4 349 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF529Q6P280 563 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 ABHD12BQ7Z5M8 362 aaPredicted RBP16■□□□□ 0.15
SMPD3-211ENST00000568373 GJC3Q8NFK1 279 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 OR1M1Q8NGA1 313 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 ADGRG7Q96K78 797 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 RBM24Q9BX46 236 aaKnown RBP16■□□□□ 0.15
SMPD3-211ENST00000568373 ULBP2Q9BZM5 246 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 FAM86C1Q9NVL1 165 aa16■□□□□ 0.15
SMPD3-211ENST00000568373 YES1P07947 543 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 POU3F2P20265 443 aaPredicted RBP15.99■□□□□ 0.15
SMPD3-211ENST00000568373 PSMB1P20618 241 aaKnown RBP15.99■□□□□ 0.15
SMPD3-211ENST00000568373 CASRP41180 1078 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 CAPZA1P52907 286 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF283Q8N7M2 679 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 OR4D6Q8NGJ1 314 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 OR2V1Q8NHB1 315 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 DEDD2Q8WXF8 326 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 MED28Q9H204 178 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 TP63Q9H3D4 680 aaPredicted RBP15.99■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF319Q9P2F9 582 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 FLVCR1Q9Y5Y0 555 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 EP300Q09472 2414 aaPredicted RBP15.99■□□□□ 0.15
SMPD3-211ENST00000568373 STMND1H3BQB6 276 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 CXCL13O43927 109 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 ALDOBP05062 364 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms