RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TIMD4Q96H15 378 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 MAP6Q96JE9 813 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 DDOQ99489 341 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 COQ7Q99807 217 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 NIPSNAP1Q9BPW8 284 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 TRIM15Q9C019 465 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 METTL17Q9H7H0 456 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-208ENST00000558827 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 FAM183AA6NL82 134 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ACOT8O14734 319 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ICMTO60725 284 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 CST1P01037 141 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 AVPP01185 164 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 HLA-DPB1P04440 258 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 SPARCP09486 303 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ACSM4P0C7M7 580 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 KITLGP21583 273 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 TNFSF4P23510 183 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 POU1F1P28069 291 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 LIPAP38571 399 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 PRKXP51817 358 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 LCN2P80188 198 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ACSM5Q6NUN0 579 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 TRPM8Q7Z2W7 1104 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ADGRG5Q8IZF4 528 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 HS3ST5Q8IZT8 346 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 ARHGAP24Q8N264 748 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 OR10S1Q8NGN2 331 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 OR51F2Q8NH61 342 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 CANT1Q8WVQ1 401 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 TMEM158Q8WZ71 300 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-208ENST00000558827 SLCO4A1Q96BD0 722 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 HDHD2Q9H0R4 259 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 MAGIXQ9H6Y5 334 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 CENPMQ9NSP4 180 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 TMEM106BQ9NUM4 274 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 IL20Q9NYY1 176 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 CYB5R1Q9UHQ9 305 aa10.58□□□□□ -0.72
SMAD3-208ENST00000558827 PRPF19Q9UMS4 504 aaKnown RBP10.58□□□□□ -0.72
SMAD3-208ENST00000558827 LOC105371242A0A075B767 164 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 F5H5P2 479 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 H3BSA7 217 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 GNGT2O14610 69 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 GYG2O15488 501 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 DEAF1O75398 565 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-208ENST00000558827 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 RAP2AP10114 183 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 SLC2A1P11166 492 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 RAC2P15153 192 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 ADRA2CP18825 462 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 PRKACGP22612 351 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 HOXA4Q00056 320 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-208ENST00000558827 TRAP1Q12931 704 aaKnown RBP10.57□□□□□ -0.72
SMAD3-208ENST00000558827 FAM201AQ5SY85 155 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 PGM2L1Q6PCE3 622 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 SHQ1Q6PI26 577 aaKnown RBP10.57□□□□□ -0.72
SMAD3-208ENST00000558827 C1orf174Q8IYL3 243 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 LNX2Q8N448 690 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 OR5L1Q8NGL2 311 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 OR6K6Q8NGW6 343 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 OR2T4Q8NH00 348 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 OR2AE1Q8NHA4 323 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 GIPC3Q8TF64 312 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 FEVQ99581 238 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 ATF6BQ99941 703 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 HCAR1Q9BXC0 346 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 MUC13Q9H3R2 512 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 PNRC2Q9NPJ4 139 aaKnown RBP10.57□□□□□ -0.72
SMAD3-208ENST00000558827 NPTNQ9Y639 398 aa10.57□□□□□ -0.72
SMAD3-208ENST00000558827 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 DHRS12A0PJE2 317 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 H3BN98 237 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ZNF593O00488 134 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 MLNRO43193 412 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 CYB5R3P00387 301 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 CD55P08174 381 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ADH4P08319 380 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 SLC6A9P48067 706 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 RGS6P49758 472 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 TAF13Q15543 124 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ZMAT1Q5H9K5 638 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 RPL13AP3Q6NVV1 102 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 C1orf229Q6ZS94 237 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 DCXRQ7Z4W1 244 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 PEG10Q86TG7 708 aaKnown RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 LINC00471Q8N535 108 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ZNF283Q8N7M2 679 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 C19orf18Q8NEA5 215 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 OR8G5Q8NG78 346 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 DVL3Q92997 716 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 ASB9Q96DX5 294 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms