RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 COQ7Q99807 217 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 CDADC1Q9BWV3 514 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 TTTY10Q9BZA0 68 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 C1orf198Q9H425 327 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 RNF121Q9H920 327 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 CCNB1IP1Q9NPC3 277 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 RHBDL2Q9NX52 303 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 PLEK2Q9NYT0 353 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 CNOT2Q9NZN8 540 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 KCNN3Q9UGI6 736 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 CLEC2DQ9UHP7 191 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 ATPIF1Q9UII2 106 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 FBXL3Q9UKT7 428 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 CCDC160A6NGH7 325 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 A6NNC1 897 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 PSMD9O00233 223 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 RAB36O95755 333 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 NGFP01138 241 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 CCDC159P0C7I6 412 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ACSM4P0C7M7 580 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 PCSK6P29122 969 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 HOXC12P31275 282 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ETV1P50549 477 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ST3GAL4Q11206 333 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 IRF3Q14653 427 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 CDONQ4KMG0 1287 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF322Q6U7Q0 402 aaPredicted RBP9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 LHFPL3Q86UP9 236 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 OR10H4Q8NGA5 316 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 OR2AJ1Q8NGZ0 328 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 THEM6Q8WUY1 208 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 MNTQ99583 582 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ATF6BQ99941 703 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 HDHD2Q9H0R4 259 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 POFUT1Q9H488 388 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ISG20L2Q9H9L3 353 aaKnown RBP9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ERVK13-1Q9NX77 482 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF319Q9P2F9 582 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 ERVK-18Q9QC07 812 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 DIMT1Q9UNQ2 313 aaKnown RBP9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 POLR1DQ9Y2S0 133 aa9.22□□□□□ -0.93
NPIPB3-210ENST00000542817 HEATR1Q9H583 2144 aaKnown RBP9.21□□□□□ -0.93
NPIPB3-210ENST00000542817 C5orf49A4QMS7 147 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 EFCAB10A6NFE3 127 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF878C9JN71 531 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ATP6V1G2-DDX39BF2Z307 99 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ABCD4O14678 606 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 FAM20BO75063 409 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 TMCC2O75069 709 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 CTAG2O75638 210 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 PNPP00491 289 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 CDK1P06493 297 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 PRF1P14222 555 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 PTAFRP25105 342 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 HTR5AP47898 357 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 OR12D2P58182 307 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 EGR3Q06889 387 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 GALEQ14376 348 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 MOGQ16653 247 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 KLHL22Q53GT1 634 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 BEX5Q5H9J7 111 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 RNLSQ5VYX0 342 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 DEGS2Q6QHC5 323 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 PLEKHG7Q6ZR37 379 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 RFPL4BQ6ZWI9 263 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 AHSA2Q719I0 299 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF679Q8IYX0 411 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ACBD7Q8N6N7 88 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 KBTBD8Q8NFY9 601 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ASB17Q8WXJ9 295 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 PPP1R14AQ96A00 147 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 C1QTNF5Q9BXJ0 243 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 KCNN2Q9H2S1 579 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 ELOVL3Q9HB03 270 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 MOV10Q9HCE1 1003 aaKnown RBP9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 CENPMQ9NSP4 180 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 LAMP5Q9UJQ1 280 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 LRP12Q9Y561 859 aa9.21□□□□□ -0.94
NPIPB3-210ENST00000542817 E7EQL1 145 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 E9PI62 339 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 SMPD2O60906 423 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 FADS2O95864 444 aaKnown RBP9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 NR4A1P22736 598 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 DCKP27707 260 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 CSNK2BP67870 215 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 MFGE8Q08431 387 aaPredicted RBP9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 ECH1Q13011 328 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 SNAI3Q3KNW1 292 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 TP53I3Q53FA7 332 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 RBM48Q5RL73 367 aaKnown RBP9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 KRT80Q6KB66 452 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 ADAM5Q6NVV9 412 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 TMEM108Q6UXF1 575 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF786Q8N393 782 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF540Q8NDQ6 660 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 TMEM171Q8WVE6 324 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms