RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GTF3AQ92664 365 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 APOBEC3DQ96AK3 386 aaPredicted RBP19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 AMELYQ99218 206 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 TEAD3Q99594 435 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 SLC29A1Q99808 456 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 ABHD6Q9BV23 337 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 CENPMQ9NSP4 180 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 IGHV4-30-2A0A087WSY4 118 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 ERCC1P07992 297 aaPredicted RBP19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 MMP15P51511 669 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 TPTEP56180 551 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 SPTSSAQ969W0 71 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 CMBLQ96DG6 245 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 COX4I2Q96KJ9 171 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 IL4I1Q96RQ9 567 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 COPS4Q9BT78 406 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 ORC6Q9Y5N6 252 aa19.41■□□□□ 0.7
SFSWAP-204ENST00000535399 C17orf100A8MU93 164 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 ZNF878C9JN71 531 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 M0R135 149 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 FOSL1P15407 271 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 NAA10P41227 235 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 RAD23AP54725 363 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 ZIK1Q3SY52 487 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 NXNL2Q5VZ03 156 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 ZBTB49Q6ZSB9 765 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 SPATC1Q76KD6 591 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 MEPCEQ7L2J0 689 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 OR5L1Q8NGL2 311 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 OTOSQ8NHW6 89 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 C10orf105Q8TEF2 133 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 SNX33Q8WV41 574 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 RNF133Q8WVZ7 376 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 HAVCR1Q96D42 359 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 ZNF799Q96GE5 643 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 C18orf12Q96KH6 178 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 RHNO1Q9BSD3 238 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 PTTG3PQ9NZH4 202 aa19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 PURGQ9UJV8 347 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-204ENST00000535399 MED13LQ71F56 2210 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 CSF3P09919 207 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 KITLGP21583 273 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 DRAM2Q6UX65 266 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 FBXW12Q6X9E4 464 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 ZNF454Q8N9F8 522 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 EME1Q96AY2 570 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 MBOAT4Q96T53 435 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 KCNJ15Q99712 375 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 KLHDC2Q9Y2U9 406 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 MTORP42345 2549 aa19.39■□□□□ 0.69
SFSWAP-204ENST00000535399 LCATP04180 440 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 DAOP14920 347 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 RAC2P15153 192 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 ANOS1P23352 680 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 OPRL1P41146 370 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 PDLIM4P50479 330 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 PRKXP51817 358 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 GGTLC2Q14390 218 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 HLXQ14774 488 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 RCN1Q15293 331 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 TAF13Q15543 124 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 LCN1P1Q5VSP4 162 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC16A9Q7RTY1 509 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 FAM168AQ92567 244 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 HRASLS5Q96KN8 279 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 REG4Q9BYZ8 158 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 YIPF3Q9GZM5 350 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 TOR3AQ9H497 397 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 MYOZ1Q9NP98 299 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 NKIRAS2Q9NYR9 191 aa19.38■□□□□ 0.69
SFSWAP-204ENST00000535399 ZSCAN5BA6NJL1 495 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 RNF223E7ERA6 249 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 TIMM8AO60220 97 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 NCR1O76036 304 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 HPXP02790 462 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 MT-ND5P03915 603 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 ANPEPP15144 967 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 ALOX5APP20292 161 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 MAGEB1P43366 347 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC15A1P46059 708 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 ZNF81P51508 661 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 HCCSP53701 268 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 GRB2P62993 217 aaKnown RBP19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 RHOUQ7L0Q8 258 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 OR8J1Q8NGP2 316 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 UBASH3BQ8TF42 649 aa19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 H2AFY2Q9P0M6 372 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 CGGBP1Q9UFW8 167 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-204ENST00000535399 A0A096LNT2 108 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 LOC390937A0A1W2PQ73 354 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 C5orf63A6NC05 138 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC22A31A6NKX4 558 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 SMAD7O15105 426 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 LYNP07948 512 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 MRPL3P09001 348 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 INHBBP09529 407 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 LIPAP38571 399 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC6A9P48067 706 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 CDC42P60953 191 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 PCGF3Q3KNV8 242 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms