RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 OR7A17O14581 309 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PLPP2O43688 288 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CYTIPO60759 359 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SBK2P0C263 348 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR8U9P0C7N5 309 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 STAG3L2P0CL84 134 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR2B8PP59922 312 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PERM1Q5SV97 790 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PGBD5Q8N414 524 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 Q8N9G6 341 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR1L1Q8NH94 360 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SLC25A44Q96H78 314 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ARPC5LQ9BPX5 153 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TWSG1Q9GZX9 223 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 UBQLN3Q9H347 655 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 HMSDA8MTL9 139 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SAP18O00422 153 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SOCS2O14508 198 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ST8SIA3O43173 380 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ARSAP15289 507 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 RUNX2Q13950 521 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ZDHHC23Q8IYP9 409 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 BCORP1Q8N888 145 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 LIPHQ8WWY8 451 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 UTP4Q969X6 686 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PTPN18Q99952 460 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SMCO4Q9NRQ5 59 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TMEM30CPA0ZSE6 113 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ARPC1BO15143 372 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ATP6V1G1O75348 118 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 M6PRP20645 277 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CALCRP30988 508 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ARSDP51689 593 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 LUMP51884 338 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 POLR2GP62487 172 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 BAMBIQ13145 260 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 HTR4Q13639 388 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CCBE1Q6UXH8 406 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TSEN54Q7Z6J9 526 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TMED4Q7Z7H5 227 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CPNE8Q86YQ8 564 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ADGRF3Q8IZF5 1079 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SPICQ8N5J4 248 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SYNPRQ8TBG9 265 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ABHD1Q96SE0 405 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 KATNB1Q9BVA0 655 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ZNF768Q9H5H4 540 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 NDUFAF4Q9P032 175 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SSX4O60224 188 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 F7P08709 466 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 CMC4P56277 68 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SQSTM1Q13501 440 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SHBQ15464 509 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TRIM61Q5EBN2 209 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TEX30Q5JUR7 227 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 C22orf42Q6IC83 251 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SLC38A9Q8NBW4 561 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR51A7Q8NH64 312 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 APH1BQ8WW43 257 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SCARF2Q96GP6 870 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 POM121L2Q96KW2 1035 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 C4orf36Q96KX1 117 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 LYRM2Q9NU23 88 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 MARCH4Q9P2E8 410 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PCDHGA9Q9Y5G4 932 aaKnown RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SCO2O43819 266 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 NXPH2O95156 264 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 MGMTP16455 207 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ZNF14P17017 642 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 NKX6-1P78426 367 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TBRG1Q3YBR2 411 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 TXNRD3NBQ6F5E7 133 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR2Y1Q8NGV0 311 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 OR5AK3PQ8NH89 298 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SCAMP4Q969E2 229 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 RHCGQ9UBD6 479 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 SLC23A2Q9UGH3 650 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 ZDHHC8Q9ULC8 765 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 FAM208BQ5VWN6 2430 aa4.48□□□□□ -1.69
PTPN13-209ENST00000511467 PLPP1O14494 284 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 AKR7A2O43488 359 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 DHRS3O75911 302 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 PAPLNO95428 1278 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 HIST1H1BP16401 226 aaKnown RBP4.47□□□□□ -1.69
PTPN13-209ENST00000511467 UBE2G2P60604 165 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 ZP4Q12836 540 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 SLC35G1Q2M3R5 365 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 ADPRMQ3LIE5 342 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 H3F3CQ6NXT2 135 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 PAQR9Q6ZVX9 377 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 NANOGP1Q8N7R0 232 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 SUMF2Q8NBJ7 301 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 LSM14AQ8ND56 463 aaKnown RBP4.47□□□□□ -1.69
PTPN13-209ENST00000511467 OR7G2Q8NG99 324 aa4.47□□□□□ -1.69
PTPN13-209ENST00000511467 TRMT61AQ96FX7 289 aaKnown RBP4.47□□□□□ -1.69
PTPN13-209ENST00000511467 OR2A5Q96R48 311 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms