RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RAMP1O60894 148 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 ADAP1O75689 374 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 ASCL1P50553 236 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 RPS4XP62701 263 aaKnown RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 OR10R2Q8NGX6 335 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 PPP1R1CQ8WVI7 109 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 GPR84Q9NQS5 396 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 MRPL22Q9NWU5 206 aaKnown RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 SLC22A23A1A5C7 686 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 GUSBP08236 651 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 EDN3P14138 238 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 ATP1B3P54709 279 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 RAP2BP61225 183 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 FUT7Q11130 342 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 ABCA1O95477 2261 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 OR14I1A6ND48 311 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 STK17BO94768 372 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 CD27P26842 260 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 ACTBP60709 375 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 ACTG1P63261 375 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 FHL1Q13642 323 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 OR6M1Q8NGM8 313 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
GPC1-209ENST00000495100 DMDP11532 3685 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 IGHV1OR21-1A0A087WYE8 117 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 XRCC3O43542 346 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 LAP3P28838 519 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 HLXQ14774 488 aaPredicted RBP12.04□□□□□ -0.48
GPC1-209ENST00000495100 SLC35D3Q5M8T2 416 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
GPC1-209ENST00000495100 SERINC1Q9NRX5 453 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 GPN3Q9UHW5 284 aaPredicted RBP12.04□□□□□ -0.48
GPC1-209ENST00000495100 NUP50Q9UKX7 468 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 RARRES3Q9UL19 164 aa12.04□□□□□ -0.48
GPC1-209ENST00000495100 A0A1B0GX78 115 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 OR5H14A6NHG9 310 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 NDUFB6O95139 128 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 CRABP1P29762 137 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 DYRK1AQ13627 763 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 DNM1P34Q6PK57 102 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 OR52N5Q8NH56 324 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 C7orf66A4D0T2 115 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 MCRIP1C9JLW8 97 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 DBHP09172 617 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 QDPRP09417 244 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 FAHP16930 419 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 TAS2R19P59542 299 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 MYBPHQ13203 477 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 SGCBQ16585 318 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 YRDCQ86U90 279 aaKnown RBP12.03□□□□□ -0.48
GPC1-209ENST00000495100 ZFP82Q8N141 532 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 STPG2Q8N412 459 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 OR4K15Q8NH41 348 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 ASB5Q8WWX0 329 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 ADAT3Q96EY9 351 aaPredicted RBP12.03□□□□□ -0.48
GPC1-209ENST00000495100 ZNF160Q9HCG1 818 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 H7C417 338 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 OR2T1O43869 369 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 BDKRB2P30411 391 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 DMWDQ09019 674 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 GRINAQ7Z429 371 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 CDC20BQ86Y33 519 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 CST11Q9H112 138 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 S1PR5Q9H228 398 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 TXNIPQ9H3M7 391 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 MTFP1Q9UDX5 166 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 PCDHGA1Q9Y5H4 931 aa12.03□□□□□ -0.48
GPC1-209ENST00000495100 DDAH2O95865 285 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 CSTBP04080 98 aaKnown RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 JMJD7P0C870 316 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 NME1P15531 152 aaKnown RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 RPA2P15927 270 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 RAB3AP20336 220 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 BLVRBP30043 206 aaPredicted RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 CSF2RBP32927 897 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 DHRS2Q13268 280 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 SP6Q3SY56 376 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 H1FNTQ75WM6 255 aaPredicted RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 PRR18Q8N4B5 295 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 ADAD2Q8NCV1 583 aaKnown RBP12.02□□□□□ -0.48
GPC1-209ENST00000495100 TMEM104Q8NE00 496 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms