RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NINJ1Q92982 152 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 ZNF799Q96GE5 643 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 COQ7Q99807 217 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 WACQ9BTA9 647 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 MARCH7Q9H992 704 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 ADGRL4Q9HBW9 690 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 TAAR3PQ9P1P4 343 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 SLC22A31A6NKX4 558 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 ZNF878C9JN71 531 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 OVOL3O00110 214 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 SSX4O60224 188 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 GNAO1P09471 354 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 COX5BP10606 129 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 PCSK6P29122 969 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 GCH1P30793 250 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 KLF3P57682 345 aaPredicted RBP9.54□□□□□ -0.88
APTX-230ENST00000494649 RPS23P62266 143 aaKnown RBP9.54□□□□□ -0.88
APTX-230ENST00000494649 SMN1Q16637 294 aaKnown RBP9.54□□□□□ -0.88
APTX-230ENST00000494649 NKPD1Q17RQ9 610 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 Q5PR19 223 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 SSX6Q7RTT6 188 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 SLC16A9Q7RTY1 509 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 GID4Q8IVV7 300 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 CNIH3Q8TBE1 160 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 MARS2Q96GW9 593 aaKnown RBP9.54□□□□□ -0.88
APTX-230ENST00000494649 SORCS2Q96PQ0 1159 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 ELOVL3Q9HB03 270 aa9.54□□□□□ -0.88
APTX-230ENST00000494649 ARFGEF3Q5TH69 2177 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 B9A039 149 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 E9PQ18 207 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 TBX1O43435 398 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 ATP6V1G2O95670 118 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 IGHV4-39P01824 125 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 ANXA2P07355 339 aaKnown RBP9.53□□□□□ -0.88
APTX-230ENST00000494649 H2BFMP0C1H6 154 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 HTR1FP30939 366 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 CX3CR1P49238 355 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 AQP4P55087 323 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 TEX30Q5JUR7 227 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 ARL9Q6T311 187 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 SLC35F2Q8IXU6 374 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 OR10H4Q8NGA5 316 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 SPTSSAQ969W0 71 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 CMBLQ96DG6 245 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 DOK1Q99704 481 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 MSL2Q9HCI7 577 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 DDX28Q9NUL7 540 aaKnown RBP9.53□□□□□ -0.88
APTX-230ENST00000494649 BEX4Q9NWD9 120 aaPredicted RBP9.53□□□□□ -0.88
APTX-230ENST00000494649 SLCO1C1Q9NYB5 712 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 IKZF2Q9UKS7 526 aa9.53□□□□□ -0.88
APTX-230ENST00000494649 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
APTX-230ENST00000494649 M0R233 179 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 SBK2P0C263 348 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 ALOX5APP20292 161 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 TPTEP56180 551 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 PSG7Q13046 419 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 CARTPTQ16568 116 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 ZNF718Q3SXZ3 478 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 C6orf52Q5T4I8 152 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 KRT77Q7Z794 578 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.52□□□□□ -0.88
APTX-230ENST00000494649 DHRSXQ8N5I4 330 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 RNF133Q8WVZ7 376 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 APH1BQ8WW43 257 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 RNFT2Q96EX2 444 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 TRMT61AQ96FX7 289 aaKnown RBP9.52□□□□□ -0.88
APTX-230ENST00000494649 ADI1Q9BV57 179 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 TBCCD1Q9NVR7 557 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 LRP12Q9Y561 859 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 PMF1-BGLAPU3KQ54 211 aa9.52□□□□□ -0.88
APTX-230ENST00000494649 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 A0A1W2PQL4 384 aaPredicted RBP9.52□□□□□ -0.89
APTX-230ENST00000494649 LYNX1G3V0Z9 82 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 SLC16A6O15403 523 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 SPRY3O43610 288 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 TIMM8AO60220 97 aaPredicted RBP9.52□□□□□ -0.89
APTX-230ENST00000494649 LYNX1P0DP58 116 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 ZNF250P15622 560 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 GABRB1P18505 474 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 OPRL1P41146 370 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 SLC15A1P46059 708 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 ZNF121P58317 390 aaPredicted RBP9.52□□□□□ -0.89
APTX-230ENST00000494649 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 EFNB3Q15768 340 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 OR2T2Q6IF00 324 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 USP51Q70EK9 711 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 FAM57BQ71RH2 274 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 ZNF525Q8N782 197 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 PACRGLQ8N7B6 248 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 APOBEC3DQ96AK3 386 aaPredicted RBP9.52□□□□□ -0.89
APTX-230ENST00000494649 MBD6Q96DN6 1003 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 KCNJ15Q99712 375 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 APOL4Q9BPW4 351 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 GTF2A1LQ9UNN4 478 aa9.52□□□□□ -0.89
APTX-230ENST00000494649 LILRA1O75019 489 aa9.51□□□□□ -0.89
APTX-230ENST00000494649 BMP4P12644 408 aa9.51□□□□□ -0.89
APTX-230ENST00000494649 MAGEB1P43366 347 aa9.51□□□□□ -0.89
APTX-230ENST00000494649 MTNR1AP48039 350 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms