RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 SPOCK1Q08629 439 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 HSPB3Q12988 150 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 PCLAFQ15004 111 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TTMPQ5BVD1 217 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ZNF311Q5JNZ3 666 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 MINOS1Q5TGZ0 78 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 FAM90A2PQ658T7 463 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TMEM225Q6GV28 225 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 RPL13AP3Q6NVV1 102 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 NIPAL3Q6P499 406 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 PLXDC2Q6UX71 529 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ZBTB49Q6ZSB9 765 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 MOB3CQ70IA8 216 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ZNF551Q7Z340 670 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 SZRD1Q7Z422 152 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 LINC00346Q8IVM7 164 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 PARP8Q8N3A8 854 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 SIGLECL1Q8N7X8 197 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 OR4C15Q8NGM1 316 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 OR13G1Q8NGZ3 307 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TMIGD2Q96BF3 282 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 FBXO17Q96EF6 278 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 AURKBQ96GD4 344 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 C7orf26Q96N11 449 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 MOGAT1Q96PD6 335 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 SH3GL1Q99961 368 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TRIM31Q9BZY9 425 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 DPY30Q9C005 99 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TXNIPQ9H3M7 391 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TUBB1Q9H4B7 451 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 RABEP2Q9H5N1 569 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 NANOGQ9H9S0 305 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 CCNB1IP1Q9NPC3 277 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 KRCC1Q9NPI7 259 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ESM1Q9NQ30 184 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 SDR39U1Q9NRG7 319 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TAAR3PQ9P1P4 343 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 CHST2Q9Y4C5 530 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 UGT2A1Q9Y4X1 527 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 DNAJC15Q9Y5T4 150 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 USH1CQ9Y6N9 552 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 MINOS1-NBL1R4GNA1 71 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ALMS1Q8TCU4 4167 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 ITPR3Q14573 2671 aa2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 SMG1Q96Q15 3661 aaKnown RBP2.26□□□□□ -2.05
DEPDC1-203ENST00000488146 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 A0A1W2PRG6 482 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 TRAPPC13A5PLN9 417 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 C9orf118A6NHY6 69 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 SH2D7A6NKC9 451 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 DHRS7CA6NNS2 312 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 BBIP1A8MTZ0 92 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 MS4A18H0YCH9 400 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ZNHIT1O43257 154 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 BANF1O75531 89 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 OR7A10O76100 309 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 LGI1O95970 557 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 C1QCP02747 245 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 LAMP1P11279 417 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ZFP36P26651 326 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 GDI2P50395 445 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 UBE2E1P51965 193 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 EFNB2P52799 333 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 MVDP53602 400 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ABCE1P61221 599 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 RPS7P62081 194 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 RPL38P63173 70 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 HBA1P69905 142 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 STX5Q13190 355 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 CEACAM7Q14002 265 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ZNF74Q16587 644 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 CEACAM16Q2WEN9 425 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 MS4A18Q3C1V0 323 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 KLF17Q5JT82 389 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 SPDYAQ5MJ70 313 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 VAX1Q5SQQ9 334 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ARMC4Q5T2S8 1044 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 GCNT6Q5T4J0 391 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 MRPL2Q5T653 305 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 GKAP1Q5VSY0 366 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 REEP3Q6NUK4 255 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 SMARCD3Q6STE5 483 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 CBLN3Q6UW01 205 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 LINGO2Q7L985 606 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 ARPINQ7Z6K5 226 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 SERPINA11Q86U17 422 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 RTN4RL2Q86UN3 420 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 SVOPLQ8N434 492 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 TMCO5AQ8N6Q1 288 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 CLDN22Q8N7P3 220 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 C11orf65Q8NCR3 313 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 OR8G5Q8NG78 346 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 OR2T11Q8NH01 316 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 OR52N5Q8NH56 324 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 NABP1Q96AH0 204 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 APOBEC3DQ96AK3 386 aaPredicted RBP2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 PHF21BQ96EK2 531 aa2.25□□□□□ -2.05
DEPDC1-203ENST00000488146 C1orf147Q96MC9 270 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms