RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ATG16L2Q8NAA4 619 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 OR8G5Q8NG78 346 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 OR13G1Q8NGZ3 307 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 SLC7A6Q92536 515 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 PTP4A1Q93096 173 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TAMM41Q96BW9 452 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 SGTBQ96EQ0 304 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 WDFY2Q96P53 400 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TECTBQ96PL2 329 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 RBP7Q96R05 134 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TRIM15Q9C019 465 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 MRPL18Q9H0U6 180 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 SIRPDQ9H106 197 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TXNIPQ9H3M7 391 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 EMC7Q9NPA0 242 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 KCNK9Q9NPC2 374 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 POLE4Q9NR33 117 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 KIF17Q9P2E2 1029 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 CTSZQ9UBR2 303 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 CORO2BQ9UQ03 480 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 HIF3AQ9Y2N7 669 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TET2Q6N021 2002 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF816-ZNF321PA0A0X1KG74 233 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 OR6C6A6NF89 314 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 IQCF6A8MYZ5 107 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 J3QW42 95 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 FBP2O00757 339 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 SGCEO43556 437 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 PIP5K1CO60331 668 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 FCN3O75636 299 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 OR5F1O95221 314 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 LIPFP07098 398 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 DBHP09172 617 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 FUT4P22083 530 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 GUCA1AP43080 201 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 NPY4RP50391 375 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 STX1BP61266 288 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 RPL27P61353 136 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 COX10Q12887 443 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 SELPLGQ14242 412 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 CYP51A1Q16850 503 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 CLEC12AQ5QGZ9 265 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 METTL11BQ5VVY1 283 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 CD276Q5ZPR3 534 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 DHRS7BQ6IAN0 325 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 C1orf94Q6P1W5 598 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 EPGNQ6UW88 154 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 PATL1Q86TB9 770 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 IGFN1Q86VF2 1251 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 SLC30A8Q8IWU4 369 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 MREGQ8N565 214 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 ANKRD42Q8N9B4 389 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 PNLDC1Q8NA58 520 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 PCYOX1LQ8NBM8 494 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 BHLHE23Q8NDY6 225 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 C19orf18Q8NEA5 215 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 FNDC8Q8TC99 324 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 Q8TCH9 128 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 MRAPQ8TCY5 172 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 LRRC8CQ8TDW0 803 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM239Q8WW34 195 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 LRTOMTQ8WZ04 291 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 LHX4Q969G2 390 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 COG8Q96MW5 612 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF582Q96NG8 517 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 WACQ9BTA9 647 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 SEMA6AQ9H2E6 1030 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 RASSF4Q9H2L5 321 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 DPAGT1Q9H3H5 408 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 SMURF1Q9HCE7 757 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 PTTG3PQ9NZH4 202 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 CCDC167Q9P0B6 97 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 ATPIF1Q9UII2 106 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 VPREB3Q9UKI3 123 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 TMCC3Q9ULS5 477 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 USH1CQ9Y6N9 552 aa4.23□□□□□ -1.73
SNRNP40-204ENST00000474025 TRAV27A0A087WT01 109 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM120BA0PK00 339 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 A6NIZ1 184 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 H7C1C5 153 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 POLR3GO15318 223 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM20BO75063 409 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 GHRHP01286 108 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 HLA-DPB1P04440 258 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 VIMP08670 466 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 FBP1P09467 338 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 IRF2P14316 349 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CTLA4P16410 223 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 TNFRSF1BP20333 461 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 FPR3P25089 353 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RGS6P49758 472 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RAD23AP54725 363 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 MTPNP58546 118 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 TAS2R41P59536 307 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CTXN1P60606 82 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RAP1BP61224 184 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ARF6P62330 175 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms