RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 IQCF6A8MYZ5 107 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 ZNF205O95201 554 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 RHCEP18577 417 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 CENPAP49450 140 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 SLC9A3R2Q15599 337 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 C8orf82Q6P1X6 216 aaPredicted RBP19.06■□□□□ 0.64
USP42-205ENST00000465073 C1orf87Q8N0U7 546 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 NEIL1Q96FI4 390 aaPredicted RBP19.06■□□□□ 0.64
USP42-205ENST00000465073 KCTD14Q9BQ13 255 aaPredicted RBP19.06■□□□□ 0.64
USP42-205ENST00000465073 TMEM246Q9BRR3 403 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 HCAR1Q9BXC0 346 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 UNKLQ9H9P5 680 aaKnown RBP19.06■□□□□ 0.64
USP42-205ENST00000465073 TMEM100Q9NV29 134 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 NDUFAF4Q9P032 175 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 AURKCQ9UQB9 309 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 LHFPL6Q9Y693 200 aa19.06■□□□□ 0.64
USP42-205ENST00000465073 IGHV2-70DA0A0C4DH43 119 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 A0A1B0GWJ7 208 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 UNC119BA6NIH7 251 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 H0YL77 283 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 IGHV4-38-2P0DP08 117 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 SELEP16581 610 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 FXYD6P3P58550 94 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 HACD2Q6Y1H2 254 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 COLCA1Q6ZS62 124 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 NLRC3Q7RTR2 1065 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 MOGAT3Q86VF5 341 aa19.05■□□□□ 0.64
USP42-205ENST00000465073 MLNRO43193 412 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 CCDC22O60826 627 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 PLATP00750 562 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 NCK1P16333 377 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 COX10Q12887 443 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 MEP1BQ16820 701 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 ZNF404Q494X3 552 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 LEG1Q6P5S2 330 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 SMARCD3Q6STE5 483 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 BHLHE23Q8NDY6 225 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 OR8B3Q8NGG8 313 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 DACT3Q96B18 629 aaPredicted RBP19.04■□□□□ 0.64
USP42-205ENST00000465073 TSSK2Q96PF2 358 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 OR8B2Q96RD0 313 aa19.04■□□□□ 0.64
USP42-205ENST00000465073 IGHV3OR16-10A0A075B7F0 116 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 KIR2DS1A0A191URI9 304 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 F5H5P2 479 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 GPANK1O95872 356 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 RSPO1Q2MKA7 263 aaPredicted RBP19.03■□□□□ 0.64
USP42-205ENST00000465073 CORO6Q6QEF8 472 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.03■□□□□ 0.64
USP42-205ENST00000465073 B9D1Q9UPM9 204 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 IGLV1-36A0A0B4J1U3 117 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 TRBV4-1A0A0J9YWV2 114 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 IGHV3-64DA0A0J9YX35 117 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 DCTN6O00399 190 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 KCNAB3O43448 404 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 FPR3P25089 353 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 GATA4P43694 442 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 PITPNBP48739 271 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 ECH1Q13011 328 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 SEC23BQ15437 767 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 KRTAP27-1Q3LI81 207 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 CELF2-AS1Q8N7Q2 184 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 C7orf34Q96L11 122 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 ERMAPQ96PL5 475 aaPredicted RBP19.03■□□□□ 0.64
USP42-205ENST00000465073 CCDC134Q9H6E4 229 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 WDR76Q9H967 626 aa19.03■□□□□ 0.64
USP42-205ENST00000465073 SRA1Q9HD15 236 aaKnown RBP19.03■□□□□ 0.64
USP42-205ENST00000465073 IRF2P14316 349 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 PMELP40967 661 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 KRT72Q14CN4 511 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 OR6V1Q8N148 313 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 SLC26A10Q8NG04 563 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 ERGIC1Q969X5 290 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 DHRS1Q96LJ7 313 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 FUZQ9BT04 418 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 ABCD2Q9UBJ2 740 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 CLN8Q9UBY8 286 aa19.02■□□□□ 0.63
USP42-205ENST00000465073 SOX21Q9Y651 276 aaPredicted RBP19.02■□□□□ 0.63
USP42-205ENST00000465073 TRAV40A0A0B4J280 105 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 PPP1R3DO95685 299 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 RENP00797 406 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 ACSM4P0C7M7 580 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 MDH1P40925 334 aaKnown RBP19.01■□□□□ 0.63
USP42-205ENST00000465073 NUDT2P50583 147 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 SLC36A3Q495N2 470 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 FAM201AQ5SY85 155 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 C16orf87Q6PH81 154 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 DCDC5Q6ZRR9 648 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 JAZF1Q86VZ6 243 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 OR52J3Q8NH60 311 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 PITX2Q99697 317 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 NUDT16L1Q9BRJ7 211 aaKnown RBP19.01■□□□□ 0.63
USP42-205ENST00000465073 SLITRK2Q9H156 845 aa19.01■□□□□ 0.63
USP42-205ENST00000465073 DCAF13Q9NV06 445 aaKnown RBP19.01■□□□□ 0.63
USP42-205ENST00000465073 SAMD4AQ9UPU9 718 aaKnown RBP19.01■□□□□ 0.63
USP42-205ENST00000465073 PHYHO14832 338 aa19■□□□□ 0.63
USP42-205ENST00000465073 ARPC3O15145 178 aa19■□□□□ 0.63
USP42-205ENST00000465073 HLA-DPB1P04440 258 aa19■□□□□ 0.63
USP42-205ENST00000465073 SMIM11AP58511 58 aa19■□□□□ 0.63
USP42-205ENST00000465073 MALLQ13021 153 aa19■□□□□ 0.63
USP42-205ENST00000465073 GK2Q14410 553 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms