RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GREB1Q4ZG55 1949 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SBF1O95248 1867 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ZGLP1P0C6A0 271 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ICAM2P13598 275 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SNRPNP63162 240 aaKnown RBP15.01□□□□□ -0.01
TCOF1-206ENST00000445265 IFITM2Q01629 132 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 DEGS2Q6QHC5 323 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 CBLN3Q6UW01 205 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 RAB11FIP2Q7L804 512 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 TMEM200AQ86VY9 491 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SUMF2Q8NBJ7 301 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 OR11H7Q8NGC8 314 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 TTC9Q92623 222 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PIGQQ9BRB3 760 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SLC22A11Q9NSA0 550 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF629Q9UEG4 869 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PIGLQ9Y2B2 252 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 TET1Q8NFU7 2136 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 CENPVL1A0A0U1RR11 272 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ALG1L2C9J202 215 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 GDF1P27539 372 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 KLF9Q13886 244 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 C9orf50Q5SZB4 431 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 H3F3CQ6NXT2 135 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF649Q9BS31 505 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 TINAGL1Q9GZM7 467 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 NELFAQ9H3P2 528 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15□□□□□ -0.01
TCOF1-206ENST00000445265 PCYT1BQ9Y5K3 369 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 TAAR5O14804 337 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 BCL2L11O43521 198 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 CD79AP11912 226 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ZP3P21754 424 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 KIR2DL1P43626 348 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 RPL23AP62750 156 aaKnown RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 RNF4P78317 190 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 HLXQ14774 488 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 CLPPQ16740 277 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 MUC20Q8N307 709 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 LILRB2Q8N423 598 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ARHGEF39Q8N4T4 335 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 FAM181AQ8N9Y4 354 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 GLYATL2Q8WU03 294 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF775Q96BV0 537 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 ST6GALNAC2Q9UJ37 374 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 HMSDA8MTL9 139 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 BAP18Q8IXM2 172 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 MAML2Q8IZL2 1156 aaPredicted RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF687Q8N1G0 1237 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 OR1J2Q8NGS2 313 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 A0A1B0GTH9 108 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ANKUB1A6NFN9 424 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 ANKRD30BLA7E2S9 258 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 GPR137BO60478 399 aa15□□□□□ -0.01
TCOF1-206ENST00000445265 NME1P15531 152 aaKnown RBP15□□□□□ -0.01
TCOF1-206ENST00000445265 SPINT1O43278 529 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 CD1AP06126 327 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 GNB3P16520 340 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ABCD3P28288 659 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 PPP1CAP62136 330 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 MRGPREQ86SM8 312 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ATG4DQ86TL0 474 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 MARCH1Q8TCQ1 289 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 EMG1Q92979 244 aaKnown RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 SPACA5Q96QH8 159 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 SDHCQ99643 169 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF576Q9H609 170 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 NECAP2Q9NVZ3 263 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 TRAPPC2LH3BP13 241 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 CNOT4O95628 575 aaKnown RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 HLA-DQB1P01920 261 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 HYAL1Q12794 435 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ECH1Q13011 328 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 PRSS42Q7Z5A4 293 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ABI3BPQ7Z7G0 1075 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ZBTB44Q8NCP5 570 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 OXGR1Q96P68 337 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF223Q9UK11 482 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 A6NLC8 198 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 MCRIP1C9JLW8 97 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 PAN3Q58A45 887 aaKnown RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 GPR157Q5UAW9 335 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ADGRG3Q86Y34 549 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 TCEAL7Q9BRU2 100 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 GDF2Q9UK05 429 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 DOCK4Q8N1I0 1966 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 TMEM272A0A1B0GTI8 110 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 MRPL33O75394 65 aaKnown RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 GLB1P16278 677 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 EPHA1P21709 976 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 APLNRP35414 380 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 SELENOPP49908 381 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 PCK2Q16822 640 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 WDR5BQ86VZ2 330 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 LGI3Q8N145 548 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ZDHHC22Q8N966 263 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF784Q8NCA9 323 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 TMED6Q8WW62 240 aa14.99□□□□□ -0.01
TCOF1-206ENST00000445265 PAPOLGQ9BWT3 736 aaKnown RBP14.99□□□□□ -0.01
TCOF1-206ENST00000445265 TAF9BQ9HBM6 251 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms