RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SMIM10L1P0DMW3 83 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 GABRR2P28476 465 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 HMOX2P30519 316 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 RRM2P31350 389 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 RFX3P48380 749 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRPL19P49406 292 aaKnown RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 PSMD4P55036 377 aaKnown RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 GPX6P59796 221 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 ATP6V0D1P61421 351 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRPS22P82650 360 aaKnown RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 SYCNQ0VAF6 134 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 C18orf21Q32NC0 220 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 XKR4Q5GH76 650 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 NANOGP8Q6NSW7 305 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 LRRC74BQ6ZQY2 392 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 LRRC8AQ8IWT6 810 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 IQCKQ8N0W5 287 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRAM1L1Q8N609 369 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 GATSQ8NAP1 163 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 TMEM104Q8NE00 496 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR4D6Q8NGJ1 314 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR5B3Q8NH48 314 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 CLHC1Q8NHS4 586 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 SMIM10Q96HG1 83 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 OPALINQ96PE5 141 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 XPO6Q96QU8 1125 aaKnown RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR8B4Q96RC9 309 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 LZTS2Q9BRK4 669 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 TMEM59Q9BXS4 323 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 ACTR3CQ9C0K3 210 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 NAA50Q9GZZ1 169 aaKnown RBP2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 CSNK1G1Q9HCP0 422 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF302Q9NR11 478 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 EURLQ9NYK6 297 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 STMN3Q9NZ72 180 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 ENPP5Q9UJA9 477 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 SCML1Q9UN30 329 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 USP47Q96K76 1375 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 LRRIQ3A6PVS8 624 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 M0R3G1 203 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 PPP1R2P9O14990 202 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 SRP72O76094 671 aaKnown RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCNB2O95067 398 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 HLA-HP01893 362 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 FGGP02679 453 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 NQO2P16083 231 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 TCN1P20061 433 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 SSR1P43307 286 aaKnown RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 YAP1P46937 504 aaKnown RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CSNK1A1P48729 337 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCR8P51685 355 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 TNNC1P63316 161 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 PON3Q15166 354 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 SYCP1Q15431 976 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 UBE2SQ16763 222 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 RPEL1Q2QD12 228 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CHRFAM7AQ494W8 412 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 HSP90AA4PQ58FG1 418 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 LINC00336Q6ZUF6 198 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 UTS2BQ765I0 119 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 STRADAQ7RTN6 431 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 APRG1Q8IVJ8 170 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 LYPD6BQ8NI32 183 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 SYNPRQ8TBG9 265 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 LRRC20Q8TCA0 184 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 TCP10LQ8TDR4 215 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 PDCD6IPQ8WUM4 868 aaKnown RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 PIH1D2Q8WWB5 315 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CIDECQ96AQ7 238 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCDC126Q96EE4 140 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 PDXPQ96GD0 296 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 COL21A1Q96P44 957 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF317Q96PQ6 595 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CSPG4P5Q96PW8 444 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 RARRES2Q99969 163 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 KCNS3Q9BQ31 491 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 MAP1LC3CQ9BXW4 147 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 TM6SF2Q9BZW4 377 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 C12orf10Q9HB07 376 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 DYRK4Q9NR20 520 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 AGPAT4Q9NRZ5 378 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 EXD2Q9NVH0 621 aa2.26□□□□□ -2.05
HMGB1P49-201ENST00000418882 CDHR2Q9BYE9 1310 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 IGLV2-18A0A075B6J9 118 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 GOLGA8QA0A0J9YX86 632 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 A0A1B0GW55 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 GSTTP1A0A1W2PQM5 241 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ERICH2A1L162 156 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCDC182A6NF36 153 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCL21O00585 134 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 NDUFAB1O14561 156 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 AIM2O14862 343 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 KMOO15229 486 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CHMP2AO43633 222 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ADRA2AP08913 450 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DUX4L2P0CJ85 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DUX4L3P0CJ86 424 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms