RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PAQR6Q6TCH4 344 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 CDC20BQ86Y33 519 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 C17orf78Q8N4C9 275 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 UBAC2Q8NBM4 344 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PLPP7Q8NBV4 271 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SLC35E1Q96K37 410 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TSNAXQ99598 290 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 BCL7BQ9BQE9 202 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NMNAT2Q9BZQ4 307 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 UNKLQ9H9P5 680 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 DIMT1Q9UNQ2 313 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GPR55Q9Y2T6 319 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NUBP2Q9Y5Y2 271 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NOTOA8MTQ0 251 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ST8SIA5O15466 376 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SMPD2O60906 423 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 FGF5P12034 268 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZIC1Q15915 447 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TATDN3Q17R31 274 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 KIRREL2Q6UWL6 708 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 C16orf47Q6ZP98 133 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 Q6ZPB1 254 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 LACC1Q8IV20 430 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TUSC5Q8IXB3 177 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SLC25A45Q8N413 288 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 BPIFB2Q8N4F0 458 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GDPD1Q8N9F7 314 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GRPEL2Q8TAA5 225 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 CMBLQ96DG6 245 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ARSGQ96EG1 525 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 RYDENQ9NUL5 291 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NTMQ9P121 344 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 LIPGQ9Y5X9 500 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ETV7Q9Y603 341 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SLC22A5O76082 557 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF136P52737 540 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF121P58317 390 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 IL13RA1P78552 427 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GPNMBQ14956 572 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ST3GAL2Q16842 350 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GLYATL3Q5SZD4 288 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PRAMEF5Q5TYX0 476 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PRAMEF6Q5VXH4 476 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PTOV1Q86YD1 416 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 Q8IYB0 196 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PTPMT1Q8WUK0 201 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 RDH5Q92781 318 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PELI1Q96FA3 418 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OR14A2Q96R54 314 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 RHNO1Q9BSD3 238 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 THAP7Q9BT49 309 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ANKRD60Q9BZ19 345 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TAS2R16Q9NYV7 291 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 A0A1B0GV50 99 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 HPGDSO60760 199 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PMP2P02689 132 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 CSRP1P21291 193 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 CEACAM3P40198 252 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 DLX5P56178 289 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 RAB4BP61018 213 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NCS1P62166 190 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 RPS25P62851 125 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NKX6-1P78426 367 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 FUT7Q11130 342 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SLC9A3R2Q15599 337 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SHEQ5VZ18 495 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OGFOD3Q6PK18 319 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF574Q6ZN55 896 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 KLHDC8BQ8IXV7 354 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OR52I1Q8NGK6 324 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 POC1BQ8TC44 478 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 LRRC29Q8WV35 223 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 FAM3DQ96BQ1 224 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 C7orf50Q9BRJ6 194 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 LRFN3Q9BTN0 628 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 SCNM1Q9BWG6 230 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 GAL3ST2Q9H3Q3 398 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF696Q9H7X3 374 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 HEYLQ9NQ87 328 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ACOXLQ9NUZ1 547 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 A4GNTQ9UNA3 340 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PPP1R3CQ9UQK1 317 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 MDFIC2A0A1B0GVS7 189 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 K7EQM0 130 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ACOT8O14734 319 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ATF1P18846 271 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 COX7A1P24310 79 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 MNX1P50219 401 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 PLA1AQ53H76 456 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF626Q68DY1 528 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OR2T2Q6IF00 324 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 ASCL5Q7RTU5 278 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 VN1R4Q7Z5H5 301 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TSEN54Q7Z6J9 526 aaKnown RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 FAM181AQ8N9Y4 354 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OR5D13Q8NGL4 314 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 OR10K1Q8NGX5 313 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 CLDN23Q96B33 292 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms