RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 SCN8AQ9UQD0 1980 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 A0A087WZY1 265 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 IGHA1P01876 353 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 CSTBP04080 98 aaKnown RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 MUC1P15941 1255 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 RPS16P62249 146 aaKnown RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 VAMP2P63027 116 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 ARF1P84077 181 aaKnown RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 SOHLH1Q5JUK2 328 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 ATPAF1Q5TC12 328 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 ZNF550Q7Z398 422 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 FAM181AQ8N9Y4 354 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 ZFP62Q8NB50 900 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 MAFAQ8NHW3 353 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 PIGTQ969N2 578 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 GFOD1Q9NXC2 390 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 FLRT3Q9NZU0 649 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 FRRS1LQ9P0K9 344 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 IGHV3-20A0A0C4DH32 117 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 A0A1W2PP11 408 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 OR2C1O95371 312 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ZIC2O95409 532 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 IFNA2P01563 188 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 POU2F2P09086 479 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 FAM157BP0CG42 384 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ADRA2CP18825 462 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ABCD3P28288 659 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 CD1CP29017 333 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 GNRHRP30968 328 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 TAGLN2P37802 199 aaKnown RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
RTN4-206ENST00000394611 CST6Q15828 149 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 MIDNQ504T8 468 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 AWAT1Q58HT5 328 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 OVCH1Q7RTY7 1134 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 DCXRQ7Z4W1 244 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 HSD17B13Q7Z5P4 300 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 BHLHE23Q8NDY6 225 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 OR5L1Q8NGL2 311 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 TGM7Q96PF1 710 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 LYSMD1Q96S90 227 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 NAA11Q9BSU3 229 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 PRDM7Q9NQW5 492 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 MEMO1Q9Y316 297 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 HEBP2Q9Y5Z4 205 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 CFAP54Q96N23 3096 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 A0A0G2JK05 382 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 MPTX1A8MV57 137 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ZNF705FA8MVS1 300 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 GPRIN2O60269 458 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 FGF19O95750 216 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ITGB2P05107 769 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 GP1BAP07359 652 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 ZNF705DP0CH99 300 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 ZNF705BP0CI00 300 aaPredicted RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 TMEM225BP0DP42 221 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 DIO1P49895 249 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 S100A12P80511 92 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 RPL18Q07020 188 aaKnown RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 MED25Q71SY5 747 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 SFXN5Q8TD22 340 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 C15orf40Q8WUR7 153 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 CNTNAP3Q9BZ76 1288 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 KLHL42Q9P2K6 505 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 NXT1Q9UKK6 140 aaKnown RBP7.96□□□□□ -1.14
RTN4-206ENST00000394611 HSF4Q9ULV5 492 aa7.96□□□□□ -1.14
RTN4-206ENST00000394611 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 CDRT15L2A8MXV6 281 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 H7C417 338 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 SULT2B1O00204 365 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 CYB5BO43169 146 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 DPM1O60762 260 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 NFATC1O95644 943 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 OLFM2O95897 454 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 GLRA1P23415 457 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 MRPS34P82930 218 aaKnown RBP7.95□□□□□ -1.14
RTN4-206ENST00000394611 RHEBQ15382 184 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 HNRNPA1L2Q32P51 320 aaKnown RBP7.95□□□□□ -1.14
RTN4-206ENST00000394611 FAM78AQ5JUQ0 283 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 CD200R1LQ6Q8B3 271 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 RCBTB1Q8NDN9 531 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 FNDC9Q8TBE3 224 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 RSPRY1Q96DX4 576 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 KTI12Q96EK9 354 aaPredicted RBP7.95□□□□□ -1.14
RTN4-206ENST00000394611 LRRC3BQ96PB8 259 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 GPHA2Q96T91 129 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 PRRT1Q99946 306 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 OCSTAMPQ9BR26 566 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 OR51B6Q9H340 312 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 MTFP1Q9UDX5 166 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 ICKQ9UPZ9 632 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 A0A0A6YYD5 115 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 LOC107986453A0A1B0GWG9 222 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 FAM230AA0A1W2PPH8 454 aa7.95□□□□□ -1.14
RTN4-206ENST00000394611 H0YIG0 161 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms