RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DAZAP1Q96EP5 407 aaKnown RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 NXF2Q9GZY0 626 aaKnown RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 RYDENQ9NUL5 291 aaKnown RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 CTRB1P17538 263 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 BAXQ07812 192 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 SCGB2A2Q13296 93 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 CTRB2Q6GPI1 263 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 ACKR3P25106 362 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 COL9A2Q14055 689 aaPredicted RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 METRNLQ641Q3 311 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 FBXL6Q8N531 539 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 SUMF1Q8NBK3 374 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 GCDHQ92947 438 aaPredicted RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 NTNG1Q9Y2I2 539 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 METTL15P1P0C7V9 234 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 TOMM34Q15785 309 aaPredicted RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 ABHD1Q96SE0 405 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 PIGQQ9BRB3 760 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 WNT16Q9UBV4 365 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 PISDQ9UG56 409 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 SERTM1A2A2V5 107 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 HRH1P35367 487 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 UBE2NP61088 152 aaKnown RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 CDH20Q9HBT6 801 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 DAPP1Q9UN19 280 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 EXOGQ9Y2C4 368 aaKnown RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 LOXHD1Q8IVV2 1947 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 SHANK3Q9BYB0 1731 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 TMEM218A2RU14 115 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 YY2O15391 372 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 APEHP13798 732 aaKnown RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 GUK1Q16774 197 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 MOGAT2Q3SYC2 334 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 PHYHD1Q5SRE7 291 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 ARIH2OSQ8N7S6 290 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 NUDCD2Q8WVJ2 157 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 ZFPM2Q8WW38 1151 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 TMEM30AQ9NV96 361 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 YBX2Q9Y2T7 364 aaKnown RBP17.9■□□□□ 0.46
SHANK1-203ENST00000391813 NINQ8N4C6 2090 aa17.9■□□□□ 0.46
SHANK1-203ENST00000391813 FZD6O60353 706 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 STT3BQ8TCJ2 826 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 VPS25Q9BRG1 176 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 PCED1AQ9H1Q7 454 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 BCO1Q9HAY6 547 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF586Q9NXT0 402 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 V9GYS6 101 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 WNK3Q9BYP7 1800 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 KIR2DS1A0A191URI9 304 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 CTDSPLO15194 276 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 LINC01565O15544 149 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 EIF4E2O60573 245 aaKnown RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 POU2F2P09086 479 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 KIR2DS4P43632 304 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 KIR2DS1Q14954 304 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 MUC20Q8N307 709 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 OR5M9Q8NGP3 310 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 WFDC5Q8TCV5 224 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 IER2Q9BTL4 223 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 CRLF2Q9HC73 371 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 ANKRD61A6NGH8 418 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 LRP3O75074 770 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 ADPRHP54922 357 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 BIDP55957 195 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 DCAF12Q5T6F0 453 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 CPEB2Q7Z5Q1 589 aaKnown RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 UBAC2Q8NBM4 344 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 OR10D4PQ8NGN7 298 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 SAT2Q96F10 170 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 HIPK2Q9H2X6 1198 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 PTRH2Q9Y3E5 179 aaKnown RBP17.89■□□□□ 0.45
SHANK1-203ENST00000391813 FLVCR1Q9Y5Y0 555 aa17.89■□□□□ 0.45
SHANK1-203ENST00000391813 PEX11BO96011 259 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 TRMT12Q53H54 448 aaKnown RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 SLC5A6Q9Y289 635 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 IRF3Q14653 427 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 C1orf140Q5VVS0 124 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 MARVELD3Q96A59 401 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF2Q9BSG1 426 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 MIXL1Q9H2W2 232 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 COA3Q9Y2R0 106 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 GSTZ1O43708 216 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 CTXN2P0C2S0 81 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 APLNRP35414 380 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF85Q03923 595 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 ZP2Q05996 745 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 C17orf67Q0P5P2 114 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 Q6ZNB5 142 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 OR5L1Q8NGL2 311 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF75AQ96N20 296 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 NUDT22Q9BRQ3 303 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 BANF2Q9H503 90 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 GDF2Q9UK05 429 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 FOXJ3Q9UPW0 622 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-203ENST00000391813 TBX19O60806 448 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 GNB3P16520 340 aa17.88■□□□□ 0.45
SHANK1-203ENST00000391813 AGBL4Q5VU57 503 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms