RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ZNF431Q8TF32 576 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-202ENST00000374876 ASB5Q8WWX0 329 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 MED29Q9NX70 200 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 ALKBH4Q9NXW9 302 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 R4GMQ9 66 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 CACNA1CQ13936 2221 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 A0A1B0GVI7 797 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 GGT3PA6NGU5 568 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 LIPT2A6NK58 231 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 SLC17A2O00624 439 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 CTAG2O75638 210 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 EFNB2P52799 333 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 OC90Q02509 493 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-202ENST00000374876 LINC00346Q8IVM7 164 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 ARMC10Q8N2F6 343 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 OR10G3Q8NGC4 313 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 SLC22A8Q8TCC7 542 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 FAM3DQ96BQ1 224 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 MRGPRX4Q96LA9 322 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 RASL10BQ96S79 203 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 POTEKPQ9BYX7 375 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 ZFP64Q9NPA5 681 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 MGAT4AQ9UM21 535 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 B3GALT5Q9Y2C3 310 aa13.79□□□□□ -0.2
CCDC40-202ENST00000374876 MEIKINA0A087WXM9 373 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 LOC100289279A0A1B0GTE1 492 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 TTLL8A6PVC2 850 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 ARPC1BO15143 372 aaKnown RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 RBBP9O75884 186 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 AQP8O94778 261 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 TGM6O95932 706 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 C2orf76Q3KRA6 126 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 PLEKHN1Q494U1 663 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 FAAP20Q6NZ36 180 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 LRFN4Q6PJG9 635 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 TMEM156Q8N614 296 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 PLPP7Q8NBV4 271 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 SIGLEC12Q96PQ1 595 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 UTP23Q9BRU9 249 aaKnown RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 NOX3Q9HBY0 568 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 SERINC1Q9NRX5 453 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 PTTG3PQ9NZH4 202 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 ABI3Q9P2A4 366 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 WIF1Q9Y5W5 379 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 A0A1B0GUH1 482 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 OR5H15A6NDH6 313 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 ETV2O00321 342 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 HPXP02790 462 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 FAUP35544 74 aaKnown RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 ASPHD2Q6ICH7 369 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 DNM1P46Q6ZS02 220 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 WDFY1Q8IWB7 410 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 OR13C3Q8NGS6 347 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 SLC25A44Q96H78 314 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-202ENST00000374876 TAS2R4Q9NYW5 299 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 HRH3Q9Y5N1 445 aa13.78□□□□□ -0.2
CCDC40-202ENST00000374876 KALRNO60229 2985 aa13.77□□□□□ -0.2
CCDC40-202ENST00000374876 IGKV1D-43A0A0B4J1Z2 117 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 H7C417 338 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 SRSF10O75494 262 aaKnown RBP13.77□□□□□ -0.21
CCDC40-202ENST00000374876 DNASE1L1P49184 302 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 TNFSF10P50591 281 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 SSR4P51571 173 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 BIDP55957 195 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 MYBPHQ13203 477 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 PCK2Q16822 640 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 PCGF3Q3KNV8 242 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 SLC25A53Q5H9E4 307 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF767PQ75MW2 155 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 OR1J4Q8NGS1 313 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 ST7LQ8TDW4 575 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 EMC6Q9BV81 110 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 SLC17A5Q9NRA2 495 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 TAS2R8Q9NYW2 309 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 LRFN1Q9P244 771 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 MTFP1Q9UDX5 166 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 OR52A1Q9UKL2 312 aa13.77□□□□□ -0.21
CCDC40-202ENST00000374876 RPH3AQ9Y2J0 694 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-202ENST00000374876 TRAV18A0A075B6X5 111 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 IGLV3-32A0A0A0MS00 114 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 A0A1W2PNV4 684 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 EFNA2O43921 213 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 TSC22D2O75157 780 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 HRGP04196 525 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ALDOBP05062 364 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms