RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NKAIN3Q8N8D7 197 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 ACBD4Q8NC06 268 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 OR2Y1Q8NGV0 311 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 B3GNT4Q9C0J1 378 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 SLC39A1Q9NY26 324 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 PIPOXQ9P0Z9 390 aa16.61■□□□□ 0.25
USP49-202ENST00000373010 IGHV3-15A0A0B4J1V0 119 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 ZNF878C9JN71 531 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 SSR4P51571 173 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 TAF13Q15543 124 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 OR1M1Q8NGA1 313 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 M1APQ8TC57 530 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 SORCS2Q96PQ0 1159 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 ANGPTL4Q9BY76 406 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 A0A1B0GTI1 187 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 TNFRSF10AO00220 468 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 LPLP06858 475 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 TPOP07202 933 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 PSMA6P60900 246 aaKnown RBP16.6■□□□□ 0.25
USP49-202ENST00000373010 GABREP78334 506 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 ZNF239Q16600 458 aaKnown RBP16.6■□□□□ 0.25
USP49-202ENST00000373010 HIST3H3Q16695 136 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 RAET1LQ5VY80 246 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 C1orf210Q8IVY1 113 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 SPICQ8N5J4 248 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 OR13C9Q8NGT0 318 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 OR6N1Q8NGY5 312 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 HEXA-AS1Q9H8Q6 139 aa16.6■□□□□ 0.25
USP49-202ENST00000373010 LIFP15018 202 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 CPN1P15169 458 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 ZNF81P51508 661 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 ACTBP60709 375 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 ACTG1P63261 375 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 ZNF468Q5VIY5 522 aaPredicted RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 RNF144BQ7Z419 303 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 HDDC2Q7Z4H3 204 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 TMEM156Q8N614 296 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 MUC3AQ02505 3323 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 CNTRLQ7Z7A1 2325 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 NSG1A0A0A6YYJ2 146 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 TMEM235A6NFC5 223 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 WIPF3A6NGB9 483 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 SNRPGP15A8MWD9 76 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 M0QYG6 137 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 UBE2MP61081 183 aaKnown RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 RPS19BP1Q86WX3 136 aaKnown RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 FAM46BQ96A09 425 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 FOXRED1Q96CU9 486 aaPredicted RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 CMBLQ96DG6 245 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 ZC3H10Q96K80 434 aaKnown RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 CHST6Q9GZX3 395 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 TMEM138Q9NPI0 162 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 PNRC2Q9NPJ4 139 aaKnown RBP16.59■□□□□ 0.25
USP49-202ENST00000373010 ZNF319Q9P2F9 582 aa16.59■□□□□ 0.25
USP49-202ENST00000373010 A0A087WZY1 265 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 ZIC3O60481 467 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 FOLR3P41439 243 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 ZNF121P58317 390 aaPredicted RBP16.58■□□□□ 0.25
USP49-202ENST00000373010 SSBP1Q04837 148 aaKnown RBP16.58■□□□□ 0.25
USP49-202ENST00000373010 ZBTB37Q5TC79 503 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 COMMD2Q86X83 199 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 GALNT16Q8N428 558 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 FTMTQ8N4E7 242 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 PAQR4Q8N4S7 273 aaPredicted RBP16.58■□□□□ 0.25
USP49-202ENST00000373010 OR8B12Q8NGG6 310 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 TINAGL1Q9GZM7 467 aaPredicted RBP16.58■□□□□ 0.25
USP49-202ENST00000373010 WDFY4Q6ZS81 3184 aa16.58■□□□□ 0.25
USP49-202ENST00000373010 OR2M5A3KFT3 312 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 SULT1C2O00338 296 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 PMS2P2O95744 297 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 ABOP16442 354 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 RPS18P62269 152 aaKnown RBP16.58■□□□□ 0.24
USP49-202ENST00000373010 UNC119Q13432 240 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 C2orf68Q2NKX9 166 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 TEX261Q6UWH6 196 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 PAQR8Q8TEZ7 354 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 SPACA5Q96QH8 159 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 UCN2Q96RP3 112 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 DPCDQ9BVM2 203 aaPredicted RBP16.58■□□□□ 0.24
USP49-202ENST00000373010 DKKL1Q9UK85 242 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 U3KQ87 197 aa16.58■□□□□ 0.24
USP49-202ENST00000373010 NCOA6Q14686 2063 aaPredicted RBP16.58■□□□□ 0.24
USP49-202ENST00000373010 LOC102725191A0A1B0GVB3 256 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 RAB3DO95716 219 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 FKBP2P26885 142 aaKnown RBP16.57■□□□□ 0.24
USP49-202ENST00000373010 TAS2R19P59542 299 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 TSPAN5P62079 268 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 H3F3AP84243 136 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 SGCAQ16586 387 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 PHYHD1Q5SRE7 291 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 TMEM81Q6P7N7 255 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 ABHD12BQ7Z5M8 362 aaPredicted RBP16.57■□□□□ 0.24
USP49-202ENST00000373010 OR5D14Q8NGL3 314 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 SH2D2AQ9NP31 389 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 HPF1Q9NWY4 346 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 KLK13Q9UKR3 277 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 SIX6O95475 246 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 ZNF20P17024 532 aa16.57■□□□□ 0.24
USP49-202ENST00000373010 RAB3AP20336 220 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms