RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ARSJQ5FYB0 599 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 OR10K2Q6IF99 312 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 ZNF425Q6IV72 752 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 FAAP20Q6NZ36 180 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 OR1N1Q8NGS0 311 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 SLC39A9Q9NUM3 307 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
TRAPPC11-201ENST00000334690 SSX4O60224 188 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 CLDN1O95832 211 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 F10P00742 488 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 NME1P15531 152 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 PTGER4P35408 488 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 ARHGEF39Q8N4T4 335 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 UBL7Q96S82 380 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 NIPSNAP3BQ9BS92 247 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 TAF9BQ9HBM6 251 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 EXOGQ9Y2C4 368 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 C17orf112F2Z3M2 114 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 OR2J2O76002 312 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 SPNP16150 400 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 PAN3Q58A45 887 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 C9orf50Q5SZB4 431 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 DND1Q8IYX4 353 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 OR4C16Q8NGL9 310 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 OR11L1Q8NGX0 322 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 INTS12Q96CB8 462 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 SMCO4Q9NRQ5 59 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 CSAG2Q9Y5P2 127 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 IL5P05113 134 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 SERPINF1P36955 418 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 TAGLNQ01995 201 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 FZD2Q14332 565 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 EXD3Q8N9H8 876 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 DMBX1Q8NFW5 382 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 ORAI1Q96D31 301 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 SPACA5Q96QH8 159 aa15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 EXO1Q9UQ84 846 aaKnown RBP15.46■□□□□ 0.07
TRAPPC11-201ENST00000334690 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 OR2W5A6NFC9 320 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 LINC01565O15544 149 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 NKX2-1P43699 371 aaPredicted RBP15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 ZIC1Q15915 447 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 H3F3CQ6NXT2 135 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 KCNRGQ8N5I3 272 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 SLC25A32Q9H2D1 315 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.06
TRAPPC11-201ENST00000334690 A0A0U1RQK1 487 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 DHHO43323 396 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 C6orf15Q6UXA7 325 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 OR51F2Q8NH61 342 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 NUDT9Q9BW91 350 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 FOXJ3Q9UPW0 622 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 MRPS2Q9Y399 296 aaKnown RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 TUBAL3A6NHL2 446 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 IFI44Q8TCB0 444 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 IP6K3Q96PC2 410 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 NGBQ9NPG2 151 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 DNAJB12Q9NXW2 375 aaKnown RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 GDF2Q9UK05 429 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 PRELID3BQ9Y3B1 194 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 CEP290O15078 2479 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 DUSP1P28562 367 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 HTD2P86397 168 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 EXOSC2Q13868 293 aaKnown RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 TBC1D28Q2M2D7 210 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 PRICKLE4Q2TBC4 344 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 KCNIP4Q6PIL6 250 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 KTI12Q96EK9 354 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 BTF3L4Q96K17 158 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 ZNF2Q9BSG1 426 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 PTDSS2Q9BVG9 487 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 FOXQ1Q9C009 403 aa15.45■□□□□ 0.06
TRAPPC11-201ENST00000334690 ANKUB1A6NFN9 424 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 DTWD2Q8NBA8 298 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 THOC3Q96J01 351 aaKnown RBP15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 TIMM8BQ9Y5J9 83 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 OTOL1A6NHN0 477 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 AKR7A2O43488 359 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 AADACP22760 399 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 FOXF1Q12946 379 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 AVPI1Q5T686 147 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 BRICD5Q6PL45 260 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 SUMF1Q8NBK3 374 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 AP1S3Q96PC3 154 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 DYNLRB1Q9NP97 96 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 KPTNQ9Y664 436 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 C4orf47A7E2U8 309 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 SHOXO15266 292 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 ZFPL1O95159 310 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 UBE2MP61081 183 aaKnown RBP15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 CLN3Q13286 438 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 LINC00303Q3SY05 128 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 TMEM217Q8N7C4 229 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 GPBAR1Q8TDU6 330 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 SLC17A5Q9NRA2 495 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 PCYT1BQ9Y5K3 369 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 SLCO1B1Q9Y6L6 691 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 EMP3P54852 163 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 HIST2H3PS2Q5TEC6 136 aa15.44■□□□□ 0.06
TRAPPC11-201ENST00000334690 SPACA9Q96E40 222 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms