RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CLRN1P58418 232 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 RASGEF1BQ0VAM2 473 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CAMK2DQ13557 499 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SLC16A9Q7RTY1 509 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 TIGD4Q8IY51 512 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 Q8NA96 180 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SYT14Q8NB59 555 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF485Q8NCK3 441 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 OR2T27Q8NH04 317 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 TMPRSS13Q9BYE2 586 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 PRORYQ9H606 182 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SDHAF2Q9NX18 166 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 KLHL9Q9P2J3 617 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CYB5R1Q9UHQ9 305 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 PFDN2Q9UHV9 154 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 FOXD3Q9UJU5 478 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SF3B6Q9Y3B4 125 aaKnown RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ACACAQ13085 2346 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF724A8MTY0 619 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 M0R233 179 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 GPR171O14626 319 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 PEX14O75381 377 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 B3GALNT1O75752 331 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 AQP8O94778 261 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 MRPL3P09001 348 aaKnown RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 NTF4P34130 210 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 WNT4P56705 351 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 GLO1Q04760 184 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 FMODQ06828 376 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 GPR176Q14439 515 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 RNPS1Q15287 305 aaKnown RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ETFDHQ16134 617 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 C3AR1Q16581 482 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 LGALSLQ3ZCW2 172 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 OR6M1Q8NGM8 313 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 OR52N1Q8NH53 320 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 FNDC9Q8TBE3 224 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 ABHD3Q8WU67 409 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 FBXW5Q969U6 566 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 MNTQ99583 582 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CLCF1Q9UBD9 225 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 CELSR3Q9NYQ7 3312 aa11.28□□□□□ -0.6
DDX39A-202ENST00000324340 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 DAPL1A0PJW8 107 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 CIB4A0PJX0 185 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 GMDSO60547 372 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 SELENOFO60613 162 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 HRGP04196 525 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 FGF2P09038 288 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 FCGR2AP12318 317 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 DNASE1P24855 282 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 SELENOPP49908 381 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF85Q03923 595 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 BTN1A1Q13410 526 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 IL18Q14116 193 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 DOC2BQ14184 412 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 PCK2Q16822 640 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 C10orf128Q5T292 105 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 RGS7BPQ6MZT1 257 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 LRFN4Q6PJG9 635 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 FAM180AQ6UWF9 173 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 LRRC28Q86X40 367 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-202ENST00000324340 CDC20BQ86Y33 519 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 GLB1L2Q8IW92 636 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 C20orf196Q8IYI0 205 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 STPG2Q8N412 459 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 MS4A15Q8N5U1 240 aa11.27□□□□□ -0.61
DDX39A-202ENST00000324340 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms