RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PRSS45Q7RTY3 260 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 GJC3Q8NFK1 279 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 OR8B12Q8NGG6 310 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 SNIP1Q8TAD8 396 aaKnown RBP16.17■□□□□ 0.18
USP39-201ENST00000323701 OR51E1Q8TCB6 317 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 LGALS14Q8TCE9 139 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 SLCO5A1Q9H2Y9 848 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 HHLA2Q9UM44 414 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 V9GY05 133 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 A0A1B0GTI1 187 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 AIPO00170 330 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 SPNP16150 400 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 EIF2S3P41091 472 aaKnown RBP16.16■□□□□ 0.18
USP39-201ENST00000323701 CX3CR1P49238 355 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 ZNF181Q2M3W8 571 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 RIPPLY2Q5TAB7 128 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 OR8H2Q8N162 312 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 OR4M1Q8NGD0 313 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 OR51A2Q8NGJ7 313 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 FOXB1Q99853 325 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 TAS2R4Q9NYW5 299 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 FAM25AB3EWG3 89 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 FAM25CB3EWG5 89 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 FAM25GB3EWG6 89 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 ACHEP22303 614 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 OR13C3Q8NGS6 347 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 CYSLTR2Q9NS75 346 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 PAQR5Q9NXK6 330 aaPredicted RBP16.16■□□□□ 0.18
USP39-201ENST00000323701 EXTL2Q9UBQ6 330 aa16.16■□□□□ 0.18
USP39-201ENST00000323701 NUFIP1Q9UHK0 495 aaKnown RBP16.16■□□□□ 0.18
USP39-201ENST00000323701 A0A0G2JMP0 313 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 A0A0X1KG70 313 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 F5H5K5 113 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 YES1P07947 543 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 CSF3P09919 207 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 PLA2G7Q13093 441 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 ZNF544Q6NX49 715 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 XKRXQ6PP77 449 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 IGFL3Q6UXB1 125 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 ZNF704Q6ZNC4 412 aaPredicted RBP16.15■□□□□ 0.18
USP39-201ENST00000323701 FAM57BQ71RH2 274 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 SKA3Q8IX90 412 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 SPACA3Q8IXA5 215 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 SLC22A24Q8N4F4 322 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 OR4M2Q8NGB6 313 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 LIN7BQ9HAP6 207 aa16.15■□□□□ 0.18
USP39-201ENST00000323701 ISPDA4D126 451 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 DLL1O00548 723 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 SSX4O60224 188 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 UBCP0CG48 685 aaKnown RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 IL7P13232 177 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 HGFACQ04756 655 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZNF169Q14929 603 aaPredicted RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 PYDC2Q56P42 97 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ELFN2Q5R3F8 820 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZNF774Q6NX45 483 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 TMEM53Q6P2H8 277 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 CHMP1BQ7LBR1 199 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 SIAH3Q8IW03 269 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZADH2Q8N4Q0 377 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZNF283Q8N7M2 679 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 POC5Q8NA72 575 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 PLPP7Q8NBV4 271 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 CCDC32Q9BV29 185 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 PLEK2Q9NYT0 353 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 EMC3Q9P0I2 261 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 LUZP4Q9P127 313 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 TBC1D24Q9ULP9 559 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZNF724A8MTY0 619 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 PDCD5O14737 125 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ZNF32P17041 273 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 IGFBP3P17936 291 aaPredicted RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 NPR2P20594 1047 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 EIF2B2P49770 351 aaKnown RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 IL18Q14116 193 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 SFRP5Q5T4F7 317 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 TMEM244Q5VVB8 128 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 LRRC28Q86X40 367 aaPredicted RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 AKR7LQ8NHP1 331 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 HPS1Q92902 700 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 ADAT3Q96EY9 351 aaPredicted RBP16.14■□□□□ 0.17
USP39-201ENST00000323701 SP140LQ9H930 580 aa16.14■□□□□ 0.17
USP39-201ENST00000323701 PTPRQQ9UMZ3 2332 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 A0A1W2PQ09 198 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SLC22A20A6NK97 555 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SLC19A2O60779 497 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 KRT33AO76009 404 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 ITGA5P08648 1049 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 CST2P09228 141 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 CTSSP25774 331 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 GFOD2Q3B7J2 385 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 OR5M9Q8NGP3 310 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 OR1J2Q8NGS2 313 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 FGGYQ96C11 551 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SLC25A38Q96DW6 304 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 KCNJ15Q99712 375 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 PRDM14Q9GZV8 571 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 SLITRK2Q9H156 845 aa16.13■□□□□ 0.17
USP39-201ENST00000323701 KCNK15Q9H427 330 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms