RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 FAM221AA4D161 298 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 M0QZ24 198 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 SMAP2Q8WU79 429 aaPredicted RBP17.37■□□□□ 0.37
LSM11-201ENST00000286307 APOBEC3DQ96AK3 386 aaPredicted RBP17.37■□□□□ 0.37
LSM11-201ENST00000286307 ZNF254O75437 659 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 GALNSP34059 522 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 BTNL3Q6UXE8 466 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 C12orf45Q8N5I9 185 aaPredicted RBP17.37■□□□□ 0.37
LSM11-201ENST00000286307 SPACA1Q9HBV2 294 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 LUMP51884 338 aaPredicted RBP17.37■□□□□ 0.37
LSM11-201ENST00000286307 SFXN4Q6P4A7 337 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 CATSPERDQ86XM0 798 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 SUMF1Q8NBK3 374 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 OR6M1Q8NGM8 313 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 NRTNQ99748 197 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 PLEKHF2Q9H8W4 249 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 ASF1BQ9NVP2 202 aa17.37■□□□□ 0.37
LSM11-201ENST00000286307 DIMT1Q9UNQ2 313 aaKnown RBP17.37■□□□□ 0.37
LSM11-201ENST00000286307 M0QYG6 137 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 IGHV4-34P06331 123 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 TBCEQ15813 527 aaPredicted RBP17.36■□□□□ 0.37
LSM11-201ENST00000286307 SMIM15Q7Z3B0 74 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 D2HGDHQ8N465 521 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 SH2D7A6NKC9 451 aaPredicted RBP17.36■□□□□ 0.37
LSM11-201ENST00000286307 H3BMQ9 156 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 PAPLNO95428 1278 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 PLXDC2Q6UX71 529 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 SLC36A1Q7Z2H8 476 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 OR2AK2Q8NG84 335 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 PINX1Q96BK5 328 aaKnown RBP17.36■□□□□ 0.37
LSM11-201ENST00000286307 FBXO34Q9NWN3 711 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 SPINK2P20155 84 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 SRD5A2P31213 254 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 RTP5Q14D33 572 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 OR2L13Q8N349 312 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 FYTTD1Q96QD9 318 aaKnown RBP17.36■□□□□ 0.37
LSM11-201ENST00000286307 GINS3Q9BRX5 216 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 PLK3Q9H4B4 646 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 AGPAT2O15120 278 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 GABRA4P48169 554 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 TNFAIP6P98066 277 aaPredicted RBP17.36■□□□□ 0.37
LSM11-201ENST00000286307 ZNF620Q6ZNG0 422 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 FAM109AQ8N4B1 249 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 EXTL1Q92935 676 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 DCAF10Q5QP82 559 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 ZNF683Q8IZ20 524 aa17.36■□□□□ 0.37
LSM11-201ENST00000286307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.36■□□□□ 0.37
LSM11-201ENST00000286307 ATAD5Q96QE3 1844 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 TRGV10A0A0A0MS01 117 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 WDR88Q6ZMY6 472 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 MZB1Q8WU39 189 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 SCN1AP35498 2009 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 CCL2P13500 99 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 SLC25A26Q70HW3 274 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 MRGPREQ86SM8 312 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 OR1F12Q8NHA8 337 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 RBMXL1Q96E39 390 aaKnown RBP17.35■□□□□ 0.37
LSM11-201ENST00000286307 TREM2Q9NZC2 230 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 DOCK5Q9H7D0 1870 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 EML2O95834 649 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 MICBQ29980 383 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 PRICKLE4Q2TBC4 344 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 SPNS3Q6ZMD2 512 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 KLF3P57682 345 aaPredicted RBP17.35■□□□□ 0.37
LSM11-201ENST00000286307 CLPPQ16740 277 aaPredicted RBP17.35■□□□□ 0.37
LSM11-201ENST00000286307 BEST4Q8NFU0 473 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 SLCO1C1Q9NYB5 712 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 KNL1Q8NG31 2342 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 NKX2-8O15522 239 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 GALR2O43603 387 aaPredicted RBP17.35■□□□□ 0.37
LSM11-201ENST00000286307 HTD2P86397 168 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 ELMOD3Q96FG2 381 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 CLEC2DQ9UHP7 191 aa17.35■□□□□ 0.37
LSM11-201ENST00000286307 KIR2DS1A0A191URI9 304 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 MAGEB4O15481 346 aaPredicted RBP17.34■□□□□ 0.37
LSM11-201ENST00000286307 IL1AP01583 271 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 NFYAP23511 347 aaPredicted RBP17.34■□□□□ 0.37
LSM11-201ENST00000286307 KIR2DS4P43632 304 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 KIR2DS1Q14954 304 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 E9PI62 339 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 ZNF626Q68DY1 528 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 OR2T2Q6IF00 324 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 LIMS2Q7Z4I7 341 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 UNKLQ9H9P5 680 aaKnown RBP17.34■□□□□ 0.37
LSM11-201ENST00000286307 TMEM82A0PJX8 343 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 OPRM1P35372 400 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 CMC2Q9NRP2 79 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 IGLV3-16A0A075B6K0 115 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 BEX5Q5H9J7 111 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 NOXA1Q86UR1 476 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 OR2T35Q8NGX2 323 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 TIGD3Q6B0B8 471 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 PPIL3Q9H2H8 161 aaKnown RBP17.34■□□□□ 0.37
LSM11-201ENST00000286307 SLC25A37Q9NYZ2 338 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 PILRBQ9UKJ0 227 aa17.34■□□□□ 0.37
LSM11-201ENST00000286307 A0A1W2PRD5 423 aa17.33■□□□□ 0.37
LSM11-201ENST00000286307 A0A1W2PRF3 423 aa17.33■□□□□ 0.37
LSM11-201ENST00000286307 A0A1W2PRM7 423 aa17.33■□□□□ 0.37
LSM11-201ENST00000286307 NPY4RP50391 375 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms