RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CAV2P51636 162 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 CYCSP99999 105 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 MEF2DQ14814 521 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 SP6Q3SY56 376 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 VWA2Q5GFL6 755 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 KLHL24Q6TFL4 600 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 CDC6Q99741 560 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 ZNF275Q9NSD4 429 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 HEATR5AQ86XA9 2040 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 SCAF4O95104 1147 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 GPR75O95800 540 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 H2BFMP0C1H6 154 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 GLRA1P23415 457 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 TAGLN2P37802 199 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 HTRA3P83110 453 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 CBLN3Q6UW01 205 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 MRGPRX3Q96LB0 322 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 BARX1Q9HBU1 254 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 CES1P1Q9UKY3 287 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 C19orf53Q9UNZ5 99 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 MEMO1Q9Y316 297 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 SDK2Q58EX2 2172 aa14.34□□□□□ -0.11
PRPF40B-201ENST00000261897 HTTP42858 3142 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 C9JQL5 133 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 TSTD3H0UI37 97 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 PPP1R2P9O14990 202 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 GPR37O15354 613 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 IFNA21P01568 189 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 UBE2KP61086 200 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 SKA3Q8IX90 412 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 RCBTB1Q8NDN9 531 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 GPX8Q8TED1 209 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 THAP3Q8WTV1 239 aaPredicted RBP14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 PHYHIPLQ96FC7 376 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 NUDT22Q9BRQ3 303 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 HHLA2Q9UM44 414 aa14.33□□□□□ -0.11
PRPF40B-201ENST00000261897 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 LOC107986453A0A1B0GWG9 222 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 COLCA2A8K830 154 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 H0YGG7 62 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 SCDO00767 359 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 TBX19O60806 448 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 ITGB2P05107 769 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 ARF3P61204 181 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 RHEBQ15382 184 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 TMEM182Q6ZP80 229 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 ANGPTL5Q86XS5 388 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 LURAP1LQ8IV03 231 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 TMPRSS5Q9H3S3 457 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 EDDM13A0A1B0GTR0 161 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 A0A1W2PQU0 124 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 C2orf72A6NCS6 295 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 H0Y8X5 98 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 SULT1A1P50225 295 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 AFF3P51826 1226 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 GUK1Q16774 197 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 VN1R4Q7Z5H5 301 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 ZNF248Q8NDW4 579 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 OR9K2Q8NGE7 335 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 C4orf45Q96LM5 186 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 NELFAQ9H3P2 528 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 HRASLS2Q9NWW9 162 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 HAO2Q9NYQ3 351 aa14.33□□□□□ -0.12
PRPF40B-201ENST00000261897 A0A087WZY1 265 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 ATXN7O15265 892 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 CYB5BO43169 146 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 CTSVO60911 334 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 SCGNO76038 276 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 PNPP00491 289 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 TACR3P29371 465 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 RAP1AP62834 184 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 MFGE8Q08431 387 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 Q3ZCU0 254 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 CARD17Q5XLA6 110 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 LPCAT3Q6P1A2 487 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 MEX3BQ6ZN04 569 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 BATF2Q8N1L9 274 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 HPSE2Q8WWQ2 592 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 EDEM2Q9BV94 578 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 C14orf166Q9Y224 244 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 IKZF1Q13422 519 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 CHRFAM7AQ494W8 412 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 ZNF343Q6P1L6 599 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 DGAT2Q96PD7 388 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 LPAR4Q99677 370 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 CYP8B1Q9UNU6 501 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 DTX4Q9Y2E6 619 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 KPTNQ9Y664 436 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 TCF20Q9UGU0 1960 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 A0A087X0M5 115 aa14.32□□□□□ -0.12
PRPF40B-201ENST00000261897 A0A1B0GX30 115 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms