RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GFI1Q99684 422 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 WACQ9BTA9 647 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 HDHD2Q9H0R4 259 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 RHBDL2Q9NX52 303 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 CKLFQ9UBR5 152 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 PTPRQQ9UMZ3 2332 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 IFITM5A6NNB3 132 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 P2RY10O00398 339 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 RRP8O43159 456 aaKnown RBP15.93■□□□□ 0.14
VIM-201ENST00000224237 APOC1P02654 83 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 FSTP19883 344 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 PCBD1P61457 104 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 RAB35Q15286 201 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 CNIH2Q6PI25 160 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 METAP1DQ6UB28 335 aaPredicted RBP15.93■□□□□ 0.14
VIM-201ENST00000224237 P4HA3Q7Z4N8 544 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 MRI1Q9BV20 369 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 ABCB10Q9NRK6 738 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 GLRX2Q9NS18 164 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 CLCF1Q9UBD9 225 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 UPB1Q9UBR1 384 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 FOXJ3Q9UPW0 622 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 NCOR2Q9Y618 2525 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 ANXA2P2A6NMY6 339 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 K7ENP7 123 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 SGCEO43556 437 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 MAS1P04201 325 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 ANXA2P07355 339 aaKnown RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 AGTR1P30556 359 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 OTX1P32242 354 aaPredicted RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 EVX1P49640 407 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 GALK2Q01415 458 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 ZNF79Q15937 498 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 RPUSD3Q6P087 351 aaKnown RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 INO80CQ6PI98 192 aaPredicted RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 XKRXQ6PP77 449 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 ZNF813Q6ZN06 617 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 SLC16A14Q7RTX9 510 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 LYSMD2Q8IV50 215 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 ZNF100Q8IYN0 542 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 RBMXL3Q8N7X1 1067 aaKnown RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 SAMD12Q8N8I0 201 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 SPTSSAQ969W0 71 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 GMPPAQ96IJ6 420 aaPredicted RBP15.92■□□□□ 0.14
VIM-201ENST00000224237 SP140LQ9H930 580 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 LUZP4Q9P127 313 aa15.92■□□□□ 0.14
VIM-201ENST00000224237 FAM25AB3EWG3 89 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 FAM25CB3EWG5 89 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 FAM25GB3EWG6 89 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 SYT7O43581 403 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 DOK2O60496 412 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 PAHP00439 452 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 ZNF32P17041 273 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 ADRA2CP18825 462 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 PTBP1P26599 531 aaKnown RBP eCLIP15.91■□□□□ 0.14
VIM-201ENST00000224237 ECH1Q13011 328 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 NUFIP2Q7Z417 695 aaKnown RBP15.91■□□□□ 0.14
VIM-201ENST00000224237 OR8B12Q8NGG6 310 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 SDHCQ99643 169 aaPredicted RBP15.91■□□□□ 0.14
VIM-201ENST00000224237 SRRQ9GZT4 340 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 SPATA2Q9UM82 520 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 RAXQ9Y2V3 346 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 A0A1B0GVI7 797 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 TTLL8A6PVC2 850 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 F5H5K5 113 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 SLC2A1P11166 492 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 TALDO1P37837 337 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 RANBP1P43487 201 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 ZNF627Q7L945 461 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 ABHD12BQ7Z5M8 362 aaPredicted RBP15.91■□□□□ 0.14
VIM-201ENST00000224237 ZNF671Q8TAW3 534 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 TIMM10BQ9Y5J6 103 aa15.91■□□□□ 0.14
VIM-201ENST00000224237 OR14I1A6ND48 311 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 M0R135 149 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 SYNGR3O43761 229 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 HNRNPCP07910 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
VIM-201ENST00000224237 ELK1P19419 428 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 SLC6A9P48067 706 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 HES5Q5TA89 166 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 ASPHD2Q6ICH7 369 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 FAM57BQ71RH2 274 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 PRSS45Q7RTY3 260 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 UBE2J2Q8N2K1 259 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 OR51E1Q8TCB6 317 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 EXTL1Q92935 676 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 ZNF799Q96GE5 643 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 CMTM3Q96MX0 182 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 TRIB1Q96RU8 372 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 CYSLTR2Q9NS75 346 aa15.9■□□□□ 0.14
VIM-201ENST00000224237 ZNF275Q9NSD4 429 aaPredicted RBP15.9■□□□□ 0.14
VIM-201ENST00000224237 PIEZO2Q9H5I5 2752 aa15.89■□□□□ 0.13
VIM-201ENST00000224237 SS18L1O75177 396 aaPredicted RBP15.89■□□□□ 0.13
VIM-201ENST00000224237 SNRPBP14678 240 aaKnown RBP15.89■□□□□ 0.13
VIM-201ENST00000224237 IGFBP3P17936 291 aaPredicted RBP15.89■□□□□ 0.13
VIM-201ENST00000224237 CFPP27918 469 aa15.89■□□□□ 0.13
VIM-201ENST00000224237 STEAP3Q658P3 488 aa15.89■□□□□ 0.13
VIM-201ENST00000224237 SKA3Q8IX90 412 aa15.89■□□□□ 0.13
VIM-201ENST00000224237 GDPD1Q8N9F7 314 aa15.89■□□□□ 0.13
VIM-201ENST00000224237 SNRNP27Q8WVK2 155 aaKnown RBP15.89■□□□□ 0.13
VIM-201ENST00000224237 ABHD17AQ96GS6 310 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms